Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   DKG76_RS07855 Genome accession   NZ_CP029465
Coordinates   1536039..1536503 (-) Length   154 a.a.
NCBI ID   WP_003238939.1    Uniprot ID   A0A9W5LHE5
Organism   Bacillus inaquosorum strain KCTC 13429     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1531039..1541503
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG76_RS07835 (DKG76_07835) kinA 1531504..1533324 (+) 1821 WP_003238947.1 sporulation histidine kinase KinA -
  DKG76_RS07840 (DKG76_07840) - 1533334..1534515 (-) 1182 WP_003238945.1 aminotransferase A -
  DKG76_RS07845 (DKG76_07845) - 1534717..1534878 (-) 162 WP_003238943.1 hypothetical protein -
  DKG76_RS07850 (DKG76_07850) cheV 1535085..1535996 (+) 912 WP_032732103.1 chemotaxis protein CheV -
  DKG76_RS07855 (DKG76_07855) kre 1536039..1536503 (-) 465 WP_003238939.1 YkyB family protein Regulator
  DKG76_RS07860 (DKG76_07860) - 1536629..1537921 (-) 1293 WP_003238936.1 MFS transporter -
  DKG76_RS07865 (DKG76_07865) - 1537997..1538491 (-) 495 WP_080030847.1 L,D-transpeptidase family protein -
  DKG76_RS07870 (DKG76_07870) - 1538548..1539408 (-) 861 WP_003238932.1 metallophosphoesterase -
  DKG76_RS07875 (DKG76_07875) fadH 1539551..1540314 (+) 764 Protein_1490 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17904.72 Da        Isoelectric Point: 10.3545

>NTDB_id=292724 DKG76_RS07855 WP_003238939.1 1536039..1536503(-) (kre) [Bacillus inaquosorum strain KCTC 13429]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAHMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=292724 DKG76_RS07855 WP_003238939.1 1536039..1536503(-) (kre) [Bacillus inaquosorum strain KCTC 13429]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCATATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTTGTGC
CAAATCGCCAGCAGCCAGCTTATCATAAACCTGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment