Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   DKG76_RS06530 Genome accession   NZ_CP029465
Coordinates   1296979..1298130 (+) Length   383 a.a.
NCBI ID   WP_003239275.1    Uniprot ID   A0A9W5LHW7
Organism   Bacillus inaquosorum strain KCTC 13429     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1291979..1303130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG76_RS06505 (DKG76_06505) - 1292641..1293858 (+) 1218 WP_080030839.1 MFS transporter -
  DKG76_RS06510 (DKG76_06510) - 1294033..1294611 (+) 579 WP_003239283.1 GNAT family N-acetyltransferase -
  DKG76_RS06515 (DKG76_06515) spx 1294792..1295187 (+) 396 WP_003239281.1 transcriptional regulator Spx -
  DKG76_RS06520 (DKG76_06520) - 1295230..1295886 (-) 657 WP_003239279.1 TerC family protein -
  DKG76_RS21895 - 1296071..1296196 (+) 126 WP_119913679.1 hypothetical protein -
  DKG76_RS06525 (DKG76_06525) mecA 1296163..1296819 (+) 657 WP_003239278.1 adaptor protein MecA Regulator
  DKG76_RS06530 (DKG76_06530) coiA 1296979..1298130 (+) 1152 WP_003239275.1 competence protein CoiA family protein Machinery gene
  DKG76_RS06535 (DKG76_06535) pepF 1298360..1300189 (+) 1830 WP_166638382.1 oligoendopeptidase F -
  DKG76_RS06540 (DKG76_06540) - 1300229..1300396 (-) 168 WP_032732134.1 hypothetical protein -
  DKG76_RS06550 (DKG76_06550) spxH 1300710..1301609 (-) 900 WP_003239271.1 protease adaptor protein SpxH -
  DKG76_RS06555 (DKG76_06555) - 1301606..1302004 (-) 399 WP_003239269.1 thiol management oxidoreductase component -
  DKG76_RS06560 (DKG76_06560) - 1302260..1302997 (-) 738 WP_003239267.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 45047.37 Da        Isoelectric Point: 9.9573

>NTDB_id=292720 DKG76_RS06530 WP_003239275.1 1296979..1298130(+) (coiA) [Bacillus inaquosorum strain KCTC 13429]
MFSAVTEDGQMVHLLGAQRSQKLKQRRFFCPACGGELDVKLGLQKAPHFAHKQNKSCSIYIEPESAYHLEGKRQLYVWLK
TQQASPLLEPYIKKINQRPDIMAKFKRHMLAVEYQCANLAPDVFQKRTEGFKQEGIIPQWIVGNSRLKRTAPSFYQLSAF
HWQFINASPYRELICYCPETRSFRRLSHIIPFYTNHSYSSVQTIPIHRAGVKDLFFTEPMPSFQYSGWTKAIHRFRHKPH
RFISKETNRLRLLFYEKRQTPLSFLPTEVFVPVIKGAVFHSPVFVWQGFLYLFITDLGYKGAPIRFSAVLQQCKLHIYKK
NISLRYECSEDCLSEAVKQYIDFLCKKGFLRETQKEIYMLNQPKEGIRSIQDLMERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=292720 DKG76_RS06530 WP_003239275.1 1296979..1298130(+) (coiA) [Bacillus inaquosorum strain KCTC 13429]
GTGTTTAGTGCTGTGACTGAAGACGGCCAAATGGTTCACCTTCTAGGCGCTCAGCGAAGCCAGAAATTAAAGCAGAGACG
ATTCTTCTGTCCGGCGTGCGGGGGAGAGCTTGATGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTCGCCCATAAACAGA
ACAAGTCCTGCTCGATATACATAGAACCGGAAAGCGCCTATCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACAGGCTTCTCCACTATTAGAACCGTATATCAAGAAAATCAATCAAAGACCCGACATCATGGCAAAGTTCAAGAG
ACACATGCTTGCTGTTGAGTATCAATGTGCCAATCTTGCTCCCGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAG
AAGGAATCATCCCGCAGTGGATTGTGGGAAACAGCCGCTTAAAACGAACTGCTCCATCCTTTTATCAGCTTTCTGCTTTC
CATTGGCAGTTTATCAATGCGAGCCCGTACAGGGAACTGATCTGTTATTGCCCGGAAACGCGTTCTTTCCGCCGGCTCAG
CCATATCATCCCGTTTTACACAAACCATTCTTATTCCTCCGTTCAAACGATCCCTATCCATCGGGCAGGTGTAAAAGATC
TTTTTTTCACTGAACCGATGCCCTCATTTCAATACTCCGGCTGGACAAAAGCGATTCATCGTTTTCGCCATAAACCCCAC
CGGTTCATCTCCAAGGAAACAAATCGCCTCAGGCTGCTGTTTTATGAAAAGCGGCAGACGCCCCTTTCTTTTCTTCCGAC
TGAAGTGTTTGTTCCTGTTATAAAAGGGGCTGTTTTTCATAGTCCGGTTTTTGTGTGGCAGGGGTTTCTATATCTGTTTA
TTACGGATCTTGGATATAAAGGCGCGCCAATTCGCTTTTCCGCCGTTTTACAGCAGTGCAAACTGCACATTTATAAAAAG
AACATTTCGCTCAGATACGAATGCAGCGAAGATTGTCTTTCAGAAGCGGTGAAACAGTACATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAATATATATGCTGAATCAGCCTAAAGAGGGTATACGCTCAATACAGGATCTCA
TGGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

87.399

97.389

0.851


Multiple sequence alignment