Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   DKG76_RS06415 Genome accession   NZ_CP029465
Coordinates   1274697..1274888 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus inaquosorum strain KCTC 13429     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1269697..1279888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKG76_RS06385 (DKG76_06385) argF 1270559..1271503 (+) 945 WP_003239321.1 ornithine carbamoyltransferase -
  DKG76_RS06390 (DKG76_06390) - 1271605..1271784 (+) 180 WP_003239319.1 YjzC family protein -
  DKG76_RS06395 (DKG76_06395) - 1271829..1272014 (-) 186 WP_003224551.1 YjzD family protein -
  DKG76_RS06400 (DKG76_06400) - 1272265..1272999 (+) 735 WP_003239317.1 hypothetical protein -
  DKG76_RS06405 (DKG76_06405) - 1273081..1273638 (+) 558 WP_003239313.1 hypothetical protein -
  DKG76_RS06410 (DKG76_06410) med 1273729..1274682 (+) 954 WP_003239311.1 transcriptional regulator Med Regulator
  DKG76_RS06415 (DKG76_06415) comZ 1274697..1274888 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  DKG76_RS06420 (DKG76_06420) - 1274918..1275145 (-) 228 WP_080010764.1 hypothetical protein -
  DKG76_RS06425 (DKG76_06425) fabH 1275309..1276247 (+) 939 WP_003239309.1 beta-ketoacyl-ACP synthase III -
  DKG76_RS06430 (DKG76_06430) fabF 1276270..1277511 (+) 1242 WP_003239308.1 beta-ketoacyl-ACP synthase II -
  DKG76_RS06435 (DKG76_06435) - 1277588..1278373 (+) 786 WP_003239307.1 DUF2268 domain-containing protein -
  DKG76_RS06440 (DKG76_06440) appD 1278562..1279548 (+) 987 WP_003239306.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=292716 DKG76_RS06415 WP_003224559.1 1274697..1274888(+) (comZ) [Bacillus inaquosorum strain KCTC 13429]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=292716 DKG76_RS06415 WP_003224559.1 1274697..1274888(+) (comZ) [Bacillus inaquosorum strain KCTC 13429]
ATGCAGCACGAAAAATCACTGGAGTTCTTGCAAATTGCCATGAAATATCTGCCTGAAGCGAAAGAACAGCTTGAAAAATC
AGGCATTGAGCTGTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment