Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   BPUM_RS05545 Genome accession   NC_009848
Coordinates   1166133..1166798 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus SAFR-032     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1161133..1171798
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BPUM_RS05515 (BPUM_1073) - 1161484..1162545 (+) 1062 WP_041816211.1 ABC transporter ATP-binding protein -
  BPUM_RS05520 (BPUM_1074) - 1162556..1163467 (+) 912 WP_372585415.1 ABC transporter ATP-binding protein -
  BPUM_RS05525 (BPUM_1075) - 1163573..1163860 (+) 288 WP_012009570.1 hypothetical protein -
  BPUM_RS05530 (BPUM_1076) - 1163997..1164575 (+) 579 WP_012009571.1 GNAT family N-acetyltransferase -
  BPUM_RS05535 (BPUM_1077) spxA 1164769..1165164 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  BPUM_RS05540 (BPUM_1078) - 1165205..1165870 (-) 666 WP_012009572.1 TerC family protein -
  BPUM_RS05545 (BPUM_1079) mecA 1166133..1166798 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  BPUM_RS05550 (BPUM_1080) cls 1166884..1168404 (+) 1521 WP_012009574.1 cardiolipin synthase -
  BPUM_RS05555 (BPUM_1081) - 1168568..1169728 (+) 1161 WP_012009575.1 competence protein CoiA -
  BPUM_RS05560 (BPUM_1082) pepF 1169943..1171769 (+) 1827 WP_285855895.1 oligoendopeptidase F -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=29270 BPUM_RS05545 WP_012009573.1 1166133..1166798(+) (mecA) [Bacillus pumilus SAFR-032]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=29270 BPUM_RS05545 WP_012009573.1 1166133..1166798(+) (mecA) [Bacillus pumilus SAFR-032]
ATGGAAATCGAAAGAATAAATGAACATACAGTAAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAGATTTGGTATAATCGCGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCACTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
ACTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774

Multiple sequence alignment