Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | DKG76_RS00245 | Genome accession | NZ_CP029465 |
| Coordinates | 44434..44724 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus inaquosorum strain KCTC 13429 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 39434..49724
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKG76_RS00205 (DKG76_00205) | darA | 39457..39786 (+) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
| DKG76_RS00210 (DKG76_00210) | - | 39799..40239 (+) | 441 | WP_003242162.1 | YaaR family protein | - |
| DKG76_RS00215 (DKG76_00215) | holB | 40251..41240 (+) | 990 | WP_003242160.1 | DNA polymerase III subunit delta' | - |
| DKG76_RS00220 (DKG76_00220) | ricT | 41243..42070 (+) | 828 | WP_003242158.1 | competence/sporulation regulator complex protein RicT | - |
| DKG76_RS00225 (DKG76_00225) | yabA | 42085..42444 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| DKG76_RS00230 (DKG76_00230) | - | 42503..43246 (+) | 744 | WP_003242156.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| DKG76_RS00235 (DKG76_00235) | - | 43233..43532 (+) | 300 | WP_003242154.1 | GIY-YIG nuclease family protein | - |
| DKG76_RS00240 (DKG76_00240) | rsmI | 43507..44385 (+) | 879 | WP_003242152.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| DKG76_RS00245 (DKG76_00245) | abrB | 44434..44724 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| DKG76_RS00250 (DKG76_00250) | metG | 45219..47213 (+) | 1995 | WP_003242150.1 | methionine--tRNA ligase | - |
| DKG76_RS00255 (DKG76_00255) | - | 47292..48059 (+) | 768 | WP_003242148.1 | TatD family hydrolase | - |
| DKG76_RS00260 (DKG76_00260) | - | 48215..49528 (+) | 1314 | WP_003242146.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=292698 DKG76_RS00245 WP_003226760.1 44434..44724(-) (abrB) [Bacillus inaquosorum strain KCTC 13429]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=292698 DKG76_RS00245 WP_003226760.1 44434..44724(-) (abrB) [Bacillus inaquosorum strain KCTC 13429]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAATTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |