Detailed information NTG0292647

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: EQH95_RS01680
• Genome accession: NZ_CP035162
• Coordinates: 318998..320119 (+)
• Length: 373 a.a.
• NCBI ID: WP_069837225.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103886
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 313998..325119

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH95_RS01655 (EQH95_01655)	ycdA	314012..315031 (-)	1020	WP_069837224.1	DUF4352 domain-containing protein	-
EQH95_RS01660 (EQH95_01660)	-	315090..315221 (-)	132	WP_003246334.1	hypothetical protein	-
EQH95_RS01665 (EQH95_01665)	ycdB	315395..316816 (+)	1422	WP_041335264.1	YcdB/YcdC domain-containing protein	-
EQH95_RS01670 (EQH95_01670)	ycdC	317003..318364 (+)	1362	WP_026113616.1	YcdB/YcdC domain-containing protein	-
EQH95_RS01675 (EQH95_01675)	cwlK	318372..318875 (-)	504	WP_046380766.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
EQH95_RS01680 (EQH95_01680)	rapF	318998..320119 (+)	1122	WP_069837225.1	response regulator aspartate phosphatase RapJ	Regulator
EQH95_RS01685 (EQH95_01685)	ycdF	320226..321002 (+)	777	WP_014478742.1	SDR family oxidoreductase	-
EQH95_RS01690 (EQH95_01690)	ycdG	321026..322711 (+)	1686	WP_031600124.1	alpha-glucosidase	-
EQH95_RS01695 (EQH95_01695)	znuA	322898..323857 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
EQH95_RS01700 (EQH95_01700)	znuC	323912..324607 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44354.20 Da
• Isoelectric Point: 4.8344

>NTDB_id=292647 EQH95_RS01680 WP_069837225.1 318998..320119(+) (rapF) [Bacillus subtilis strain SRCM103886]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAAEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLLNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=292647 EQH95_RS01680 WP_069837225.1 318998..320119(+) (rapF) [Bacillus subtilis strain SRCM103886]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTACTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAGCTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGACTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGCAGAGGCGTATGATCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAACTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGCTGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (219-287)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405