Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   DKE43_RS01910 Genome accession   NZ_CP029464
Coordinates   370252..370917 (+) Length   221 a.a.
NCBI ID   WP_012009573.1    Uniprot ID   -
Organism   Bacillus pumilus strain ZB201701     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 365252..375917
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DKE43_RS01880 (DKE43_01885) - 365570..366658 (+) 1089 WP_095285016.1 ABC transporter ATP-binding protein -
  DKE43_RS01885 (DKE43_01890) - 366660..367580 (+) 921 WP_034663259.1 ATP-binding cassette domain-containing protein -
  DKE43_RS01890 (DKE43_01895) - 367686..367973 (+) 288 WP_060596004.1 hypothetical protein -
  DKE43_RS01895 (DKE43_01900) - 368110..368688 (+) 579 WP_060596005.1 GNAT family N-acetyltransferase -
  DKE43_RS01900 (DKE43_01905) spxA 368882..369277 (+) 396 WP_003211421.1 transcriptional regulator SpxA -
  DKE43_RS01905 (DKE43_01910) - 369324..369989 (-) 666 WP_060596006.1 TerC family protein -
  DKE43_RS01910 (DKE43_01915) mecA 370252..370917 (+) 666 WP_012009573.1 adaptor protein MecA Regulator
  DKE43_RS01915 (DKE43_01920) cls 371003..372523 (+) 1521 WP_060596007.1 cardiolipin synthase -
  DKE43_RS01920 (DKE43_01925) - 372686..373846 (+) 1161 WP_106048722.1 competence protein CoiA family protein -
  DKE43_RS01925 (DKE43_01930) pepF 374061..375887 (+) 1827 WP_282959334.1 oligoendopeptidase F Regulator

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 26405.18 Da        Isoelectric Point: 3.9851

>NTDB_id=292647 DKE43_RS01910 WP_012009573.1 370252..370917(+) (mecA) [Bacillus pumilus strain ZB201701]
MEIERINEHTVKFYISYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIVVTKAQL
SKDGQKLELPIPEDKKDQTDEESLDALLDDFQKEEQDQEDHNEKDKKLQLQFVLKMDDFEDLIALSQLNMQDFTTSLYSF
ENRYYLYVDFHEDLSDEQVENKLSILLEYAHESVVSIYRLKEYGQLIIEGNALETIQQHFS

Nucleotide


Download         Length: 666 bp        

>NTDB_id=292647 DKE43_RS01910 WP_012009573.1 370252..370917(+) (mecA) [Bacillus pumilus strain ZB201701]
ATGGAAATCGAAAGAATTAATGAACATACAGTGAAATTTTATATTTCCTACGGTGATATTGAAGACCGCGGATTTGACCG
TGAAGAAATTTGGTATAATCGTGAACGCAGTGAAGAGCTGTTTTGGGAAGTAATGGACGAAGTGCACGAAGAAGAAGAAT
TTGCAGTTGAGGGACCTCTTTGGATTCAAGTGCAGGCACTTGACAAAGGTCTTGAAATTGTCGTGACGAAAGCCCAACTT
TCTAAAGATGGACAAAAGCTCGAATTGCCGATTCCAGAAGATAAAAAAGATCAAACAGATGAAGAAAGTCTAGACGCACT
GCTTGATGATTTTCAAAAAGAAGAGCAGGATCAAGAAGACCATAATGAGAAGGACAAAAAACTTCAACTTCAATTTGTGT
TGAAAATGGATGACTTTGAAGATTTGATTGCACTTTCTCAATTAAATATGCAGGATTTTACCACAAGTTTATATTCGTTT
GAAAACCGTTATTATCTATATGTTGACTTCCACGAGGATTTGTCAGATGAGCAAGTGGAGAATAAGCTCAGCATTTTGCT
TGAATATGCTCATGAATCAGTGGTCAGCATTTACAGACTGAAAGAATACGGTCAGCTGATTATCGAAGGAAATGCCCTTG
AAACGATTCAACAGCACTTCTCGTAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

77.376

100

0.774

Multiple sequence alignment