Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | DKE43_RS01400 | Genome accession | NZ_CP029464 |
| Coordinates | 263982..264560 (+) | Length | 192 a.a. |
| NCBI ID | WP_060595938.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain ZB201701 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 258982..269560
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DKE43_RS01380 (DKE43_01385) | - | 259474..260769 (-) | 1296 | WP_034663533.1 | globin-coupled sensor protein | - |
| DKE43_RS01385 (DKE43_01390) | - | 260861..262393 (-) | 1533 | WP_060595935.1 | FAD-dependent oxidoreductase | - |
| DKE43_RS01390 (DKE43_01395) | - | 262539..263399 (+) | 861 | WP_060595936.1 | SDR family oxidoreductase | - |
| DKE43_RS01395 (DKE43_01400) | - | 263456..263692 (-) | 237 | WP_060595937.1 | IDEAL domain-containing protein | - |
| DKE43_RS01400 (DKE43_01405) | comK | 263982..264560 (+) | 579 | WP_060595938.1 | competence protein ComK | Regulator |
| DKE43_RS01405 (DKE43_01410) | - | 264729..265835 (+) | 1107 | WP_060595939.1 | D-TA family PLP-dependent enzyme | - |
| DKE43_RS01410 (DKE43_01415) | - | 266190..266672 (+) | 483 | WP_066031075.1 | hypothetical protein | - |
| DKE43_RS01415 (DKE43_01420) | - | 266704..268143 (-) | 1440 | WP_066031074.1 | PLP-dependent aminotransferase family protein | - |
| DKE43_RS01420 (DKE43_01425) | - | 268289..269458 (+) | 1170 | WP_127686836.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22377.39 Da Isoelectric Point: 7.8904
>NTDB_id=292639 DKE43_RS01400 WP_060595938.1 263982..264560(+) (comK) [Bacillus pumilus strain ZB201701]
MSGISETPLDSYVINQTTMAILPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVELDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQTTMAILPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVELDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=292639 DKE43_RS01400 WP_060595938.1 263982..264560(+) (comK) [Bacillus pumilus strain ZB201701]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGATCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GTTGCAGATTCTTCGGCTCAAGCTATGCGGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATATCTCACAAGCCTCCA
ATTGTGATTGACTCATCCAATCATTTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCGAACTCG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGA
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAACAACAATGGCGATCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTACGTTGAATTAAAGCCCCTGCAAATTATTGAACGCA
GTTGCAGATTCTTCGGCTCAAGCTATGCGGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATATCTCACAAGCCTCCA
ATTGTGATTGACTCATCCAATCATTTGTATTTCTTCCCAACCTATTCATCCAACCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCGAACTCG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACGAAATTTCAAGATCGCCTTGATGGA
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTTCGGAACAGATATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.458 |
100 |
0.615 |