Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   BPUM_RS05050 Genome accession   NC_009848
Coordinates   1062950..1063900 (+) Length   316 a.a.
NCBI ID   WP_012009485.1    Uniprot ID   A8FBQ1
Organism   Bacillus pumilus SAFR-032     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1057950..1068900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BPUM_RS05030 (BPUM_0980) - 1059177..1059659 (+) 483 WP_012009481.1 hypothetical protein -
  BPUM_RS05035 (BPUM_0981) - 1059690..1061129 (-) 1440 WP_012009482.1 PLP-dependent aminotransferase family protein -
  BPUM_RS05040 (BPUM_0982) - 1061274..1062443 (+) 1170 WP_041815353.1 MFS transporter -
  BPUM_RS05045 (BPUM_0983) - 1062509..1062784 (+) 276 WP_012009484.1 barstar family protein -
  BPUM_RS05050 (BPUM_0984) ceuB 1062950..1063900 (+) 951 WP_012009485.1 ABC transporter permease Machinery gene
  BPUM_RS05055 (BPUM_0985) - 1063893..1064843 (+) 951 WP_012009486.1 iron chelate uptake ABC transporter family permease subunit -
  BPUM_RS05060 (BPUM_0986) - 1064834..1065592 (+) 759 WP_012009487.1 ABC transporter ATP-binding protein -
  BPUM_RS05065 (BPUM_0987) - 1065615..1066559 (+) 945 WP_012009488.1 siderophore ABC transporter substrate-binding protein -
  BPUM_RS05070 (BPUM_0988) - 1066700..1067668 (+) 969 WP_012009489.1 LCP family protein -
  BPUM_RS05075 (BPUM_0989) - 1067737..1068099 (-) 363 WP_041815357.1 hypothetical protein -
  BPUM_RS05080 (BPUM_0990) - 1068252..1068869 (+) 618 WP_012009491.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34942.35 Da        Isoelectric Point: 9.7475

>NTDB_id=29263 BPUM_RS05050 WP_012009485.1 1062950..1063900(+) (ceuB) [Bacillus pumilus SAFR-032]
MKLYQLSLLFVCLACVSLFVGVQDVSILQLFHLTDEQVHTLVSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILVAMLVFTQASPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSVWLQGDFSLIVQGRYELLYLSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=29263 BPUM_RS05050 WP_012009485.1 1062950..1063900(+) (ceuB) [Bacillus pumilus SAFR-032]
ATGAAGTTGTATCAATTAAGTTTATTATTTGTATGTTTGGCATGTGTATCACTGTTTGTCGGTGTACAGGATGTGTCCAT
TTTACAGCTGTTTCATTTAACAGATGAACAAGTGCATACGTTAGTTTCAAGTCGCATCCCGCGTCTCATGAGTATTGTGC
TTGCTGGCATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGTATGACGAGGAATAAATTTGTTTCCCCCACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGTCGCAATGCTTGTTTTTACGCAGGCGAGCCCGCTCATGAAAATGGG
CATCGCGTTTCTATTTACTTTAGCTGGGAACCTTCTTTTCTTAAAAATTCTGCGGCATATTAAGGTGAACGATACGATCT
ATGTACCGTTAGTCGGCTTAATGTTTGGCGGGATTGTTAGTTCAATATCTACGTTTATAGCCTATAAATATGATCTGATC
CAAAACGTATCCGTATGGCTTCAAGGGGATTTTTCTCTTATTGTTCAGGGACGTTATGAACTGCTCTATCTGAGTGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTAGCAGGTATGGGCGAGAGCTTTGCTGTTAACTTAGGTT
TAACGTATAAACGTGTGATGGCGGTTGGTTTGGTGATTGTTTCGATGATTACATCTGTCACCATATTAACTGTCGGAATG
CTGCCATTCCTAGGCTTAATCATTCCGAATATTGTATCGATCTACCGCGGCGATCACTTGAAAAAGAGCCTTCCGCATAC
AGCCTTACTAGGAGCCATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATTTCAGTTG
GGCTTATGGTCGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8FBQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.827

95.253

0.494

Multiple sequence alignment