Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | BPUM_RS05020 | Genome accession | NC_009848 |
| Coordinates | 1057020..1057598 (+) | Length | 192 a.a. |
| NCBI ID | WP_012009479.1 | Uniprot ID | A8FBP5 |
| Organism | Bacillus pumilus SAFR-032 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1052020..1062598
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BPUM_RS19555 | - | 1052512..1053123 (-) | 612 | WP_404841273.1 | methyl-accepting chemotaxis protein | - |
| BPUM_RS19560 | - | 1053268..1053807 (-) | 540 | Protein_958 | protoglobin family protein | - |
| BPUM_RS05005 (BPUM_0975) | - | 1053899..1055431 (-) | 1533 | WP_012009477.1 | FAD-dependent oxidoreductase | - |
| BPUM_RS05010 (BPUM_0976) | - | 1055577..1056437 (+) | 861 | WP_012009478.1 | SDR family oxidoreductase | - |
| BPUM_RS05015 (BPUM_0977) | - | 1056500..1056730 (-) | 231 | WP_003210924.1 | IDEAL domain-containing protein | - |
| BPUM_RS05020 (BPUM_0978) | comK | 1057020..1057598 (+) | 579 | WP_012009479.1 | competence protein ComK | Regulator |
| BPUM_RS05025 (BPUM_0979) | - | 1057758..1058864 (+) | 1107 | WP_012009480.1 | D-TA family PLP-dependent enzyme | - |
| BPUM_RS05030 (BPUM_0980) | - | 1059177..1059659 (+) | 483 | WP_012009481.1 | hypothetical protein | - |
| BPUM_RS05035 (BPUM_0981) | - | 1059690..1061129 (-) | 1440 | WP_012009482.1 | PLP-dependent aminotransferase family protein | - |
| BPUM_RS05040 (BPUM_0982) | - | 1061274..1062443 (+) | 1170 | WP_041815353.1 | MFS transporter | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22332.40 Da Isoelectric Point: 8.7996
>NTDB_id=29262 BPUM_RS05020 WP_012009479.1 1057020..1057598(+) (comK) [Bacillus pumilus SAFR-032]
MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
MSGISETPLDSYVINQATMAVLPVEEGKRVYSKVIERETSFYVELKPLQIIERSCRFFGSSYAGRKAGTYEVTGISHKPP
IVIDSSNHLYFFPTYSSNRPQCGWISHKYIHTFQESSLGDTVVIFTNEQTVKLDVSYKSFESQVHRTAYLRTKFQDRLDG
GLPKKQEFMLYPKEQQLNLVYDFILRELRNRY
Nucleotide
Download Length: 579 bp
>NTDB_id=29262 BPUM_RS05020 WP_012009479.1 1057020..1057598(+) (comK) [Bacillus pumilus SAFR-032]
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAGCAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTATGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCTCACAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACTTATTCATCCAATCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACAAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
GTGTCAGGAATTAGTGAAACACCTTTAGATTCATACGTCATTAATCAAGCAACAATGGCGGTCCTTCCGGTTGAAGAAGG
AAAAAGAGTATATTCAAAAGTCATAGAAAGAGAGACAAGCTTTTATGTTGAATTAAAACCTCTGCAAATTATTGAACGCA
GCTGCCGATTCTTCGGCTCAAGCTATGCAGGCAGAAAAGCGGGAACATATGAAGTAACAGGTATTTCTCACAAGCCTCCC
ATTGTGATTGACTCATCCAATCATCTGTATTTCTTCCCAACTTATTCATCCAATCGTCCTCAGTGCGGCTGGATCTCCCA
CAAATACATTCATACCTTCCAGGAATCATCCCTCGGAGACACGGTGGTCATCTTTACAAATGAGCAAACCGTCAAACTTG
ATGTCTCATATAAATCATTTGAGAGTCAGGTGCACAGAACAGCGTATCTCCGAACAAAATTTCAAGATCGTCTTGATGGT
GGTCTTCCTAAAAAACAAGAATTTATGCTGTATCCAAAGGAACAACAGCTCAACCTTGTATACGATTTTATATTAAGGGA
GCTACGGAACAGATATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
61.979 |
100 |
0.62 |