Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   DJ572_RS05660 Genome accession   NZ_CP029461
Coordinates   1093504..1093695 (+) Length   63 a.a.
NCBI ID   WP_119899241.1    Uniprot ID   -
Organism   Bacillus subtilis strain QB61     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1088504..1098695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ572_RS05630 (DJ572_05640) argF 1089369..1090328 (+) 960 WP_014476421.1 ornithine carbamoyltransferase -
  DJ572_RS05635 (DJ572_05645) yjzC 1090414..1090593 (+) 180 WP_003245356.1 YjzC family protein -
  DJ572_RS05640 (DJ572_05650) yjzD 1090639..1090824 (-) 186 WP_029317607.1 DUF2929 domain-containing protein -
  DJ572_RS05645 (DJ572_05655) - 1091073..1091807 (+) 735 WP_014479433.1 hypothetical protein -
  DJ572_RS05650 (DJ572_05660) - 1091889..1092446 (+) 558 WP_119899239.1 hypothetical protein -
  DJ572_RS05655 (DJ572_05665) med 1092536..1093489 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  DJ572_RS05660 (DJ572_05670) comZ 1093504..1093695 (+) 192 WP_119899241.1 ComG operon transcriptional repressor ComZ Regulator
  DJ572_RS05665 (DJ572_05675) yjzB 1093725..1093964 (-) 240 WP_003232972.1 spore coat protein YjzB -
  DJ572_RS05670 (DJ572_05680) fabH 1094129..1095067 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  DJ572_RS05675 (DJ572_05685) fabF 1095090..1096331 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  DJ572_RS05680 (DJ572_05690) yjaZ 1096407..1097192 (+) 786 WP_119899243.1 DUF2268 domain-containing protein -
  DJ572_RS05685 (DJ572_05695) appD 1097384..1098370 (+) 987 WP_046160279.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7200.25 Da        Isoelectric Point: 4.2564

>NTDB_id=292553 DJ572_RS05660 WP_119899241.1 1093504..1093695(+) (comZ) [Bacillus subtilis strain QB61]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMGEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=292553 DJ572_RS05660 WP_119899241.1 1093504..1093695(+) (comZ) [Bacillus subtilis strain QB61]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGGGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984

Multiple sequence alignment