Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   DJ572_RS04135 Genome accession   NZ_CP029461
Coordinates   811582..812376 (+) Length   264 a.a.
NCBI ID   WP_038428646.1    Uniprot ID   -
Organism   Bacillus subtilis strain QB61     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 806582..817376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ572_RS04105 (DJ572_04110) sxzA 807420..808451 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  DJ572_RS04110 (DJ572_04115) yfhB 808567..809448 (+) 882 WP_015715533.1 PhzF family phenazine biosynthesis isomerase -
  DJ572_RS04115 (DJ572_04120) yfhC 809536..810120 (+) 585 WP_003243940.1 nitroreductase -
  DJ572_RS04120 (DJ572_04125) yfhD 810159..810350 (-) 192 WP_003233561.1 YfhD family protein -
  DJ572_RS04125 (DJ572_04130) yfhE 810417..810527 (-) 111 WP_003223230.1 YfhE family protein -
  DJ572_RS04130 (DJ572_04135) yfhF 810582..811493 (-) 912 WP_119899154.1 TIGR01777 family oxidoreductase -
  DJ572_RS04135 (DJ572_04140) recX 811582..812376 (+) 795 WP_038428646.1 recombination regulator RecX Regulator
  DJ572_RS04140 (DJ572_04145) yfhH 812378..812692 (+) 315 WP_038428648.1 YfhH family protein -
  DJ572_RS04145 (DJ572_04150) yfhI 812836..814029 (+) 1194 WP_003243500.1 MFS transporter -
  DJ572_RS04150 (DJ572_04155) sspK 814061..814213 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  DJ572_RS04155 (DJ572_04160) yfhJ 814338..814607 (+) 270 WP_003243789.1 YfhJ family protein -
  DJ572_RS04160 (DJ572_04165) yfhK 814752..815270 (+) 519 WP_029317456.1 SH3 domain-containing protein -
  DJ572_RS04165 (DJ572_04170) spdL 815355..815672 (+) 318 WP_038428649.1 SdpC immunity protein SpdL -
  DJ572_RS04170 (DJ572_04175) ephM 815674..816534 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31029.23 Da        Isoelectric Point: 6.6686

>NTDB_id=292544 DJ572_RS04135 WP_038428646.1 811582..812376(+) (recX) [Bacillus subtilis strain QB61]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFASAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=292544 DJ572_RS04135 WP_038428646.1 811582..812376(+) (recX) [Bacillus subtilis strain QB61]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCTCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAGGATCAGACAAGGGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAACTTTCGACGAAAGAACTTAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment