Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   DJ572_RS01720 Genome accession   NZ_CP029461
Coordinates   341340..342290 (+) Length   316 a.a.
NCBI ID   WP_014475804.1    Uniprot ID   A0A0C3FBZ6
Organism   Bacillus subtilis strain QB61     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 336340..347290
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ572_RS01695 (DJ572_01690) rapC 337799..338947 (+) 1149 WP_119899023.1 response regulator aspartate phosphatase RapC Regulator
  DJ572_RS01700 (DJ572_01695) phrC 338931..339053 (+) 123 WP_003224994.1 phosphatase RapC inhibitor PhrC Regulator
  DJ572_RS01705 (DJ572_01700) yczM 339153..339242 (-) 90 WP_015482794.1 YjcZ family sporulation protein -
  DJ572_RS01710 (DJ572_01705) yczN 339324..339437 (-) 114 WP_003234495.1 YjcZ family sporulation protein -
  DJ572_RS01715 (DJ572_01710) thrD 339591..340955 (-) 1365 WP_038428355.1 aspartate kinase -
  DJ572_RS01720 (DJ572_01715) ceuB 341340..342290 (+) 951 WP_014475804.1 petrobactin ABC transporter permease YclN Machinery gene
  DJ572_RS01725 (DJ572_01720) yclO 342283..343230 (+) 948 WP_003246705.1 petrobactin ABC transporter permease YclO -
  DJ572_RS01730 (DJ572_01725) yclP 343224..343982 (+) 759 WP_003234487.1 petrobactin ABC transporter ATP-binding protein YclP -
  DJ572_RS01735 (DJ572_01730) yclQ 344004..344957 (+) 954 WP_038428358.1 petrobactin ABC transporter substrate-binding protein YclQ -
  DJ572_RS01740 (DJ572_01735) cdaE 345004..346422 (-) 1419 WP_003234482.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34871.27 Da        Isoelectric Point: 9.9364

>NTDB_id=292542 DJ572_RS01720 WP_014475804.1 341340..342290(+) (ceuB) [Bacillus subtilis strain QB61]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRIIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=292542 DJ572_RS01720 WP_014475804.1 341340..342290(+) (ceuB) [Bacillus subtilis strain QB61]
ATGAAGCTACGTTACTTATTTATTCTACTTATCATATTAGCAGTCACATCTGTATTTATCGGTGTAGAAGATCTGTCGCC
GCTTGATCTCTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTGATCAGCATTGTCA
TCGCGGGATTAAGCATGAGCATCTGCGGTTTGATTATGCAGCAGATCAGCAGAAATAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCGAGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTTGCAGGAAATTTTCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACATTTATCGCATATAAATATGACTTGATC
CAGAATGTGTCATCATGGCTGCAGGGAGACTTCTCTTTAGTCGTGAAAGGAAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTCATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGTGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTGTTGGGAGCAGTTTTTGTGCTGTTTTGCGATATACTGGGCAGAATCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0C3FBZ6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525

Multiple sequence alignment