Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   DJ533_RS14295 Genome accession   NZ_CP029397
Coordinates   2486416..2487369 (-) Length   317 a.a.
NCBI ID   WP_065994733.1    Uniprot ID   A0A2S2FID3
Organism   Acinetobacter defluvii strain WCHA30     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2481416..2492369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ533_RS14270 (DJ533_14300) - 2481996..2482121 (+) 126 WP_089024797.1 DUF2474 domain-containing protein -
  DJ533_RS14275 (DJ533_14305) - 2482255..2483658 (+) 1404 WP_065994699.1 PLP-dependent aminotransferase family protein -
  DJ533_RS14280 (DJ533_14310) - 2483743..2484702 (-) 960 WP_065994700.1 siderophore ABC transporter substrate-binding protein -
  DJ533_RS14285 (DJ533_14315) - 2484712..2485476 (-) 765 WP_065994701.1 ABC transporter ATP-binding protein -
  DJ533_RS14290 (DJ533_14320) - 2485461..2486423 (-) 963 WP_065994702.1 iron chelate uptake ABC transporter family permease subunit -
  DJ533_RS14295 (DJ533_14325) ceuB 2486416..2487369 (-) 954 WP_065994733.1 ABC transporter permease Machinery gene
  DJ533_RS18960 - 2487595..2488017 (+) 423 Protein_2304 IS3 family transposase -
  DJ533_RS14300 (DJ533_14335) - 2488213..2489415 (-) 1203 WP_065994704.1 MFS transporter -
  DJ533_RS14305 (DJ533_14340) - 2489651..2490172 (-) 522 WP_065994705.1 acyl-CoA thioesterase -
  DJ533_RS14310 (DJ533_14345) - 2490321..2490506 (-) 186 WP_065994706.1 hypothetical protein -
  DJ533_RS14315 (DJ533_14350) - 2490676..2491650 (-) 975 WP_065994734.1 patatin-like phospholipase family protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34385.65 Da        Isoelectric Point: 9.6555

>NTDB_id=292230 DJ533_RS14295 WP_065994733.1 2486416..2487369(-) (ceuB) [Acinetobacter defluvii strain WCHA30]
MLKRRFLLLLLILLSGISLFVGVGDVSITGLLAGNAADWELFWTSRLPRLMAILVAGAGLSVCGLIMQTLSRNRFVSPTT
AGLFDCARLGVLIAIILLPTASIFVKTSFAIIITLIGAMLFMQILARLKHRDTVFIPLVGMIFGSIISAVTTFIALQLDL
LQSLAGWLQGDFSTILSGKYELIYLSLPILALVYVFANRFILAGLGDDFATNLGLNYQQTLFIGLLLVSVITGVVIVTVG
VIPFLGLIVPNIVSLYLGDNIRKTLSHTALLGALLVLLCDVFGRIVIFPYEVSISLIMGVLGSAIFLWLLIRSYRHV

Nucleotide


Download         Length: 954 bp        

>NTDB_id=292230 DJ533_RS14295 WP_065994733.1 2486416..2487369(-) (ceuB) [Acinetobacter defluvii strain WCHA30]
CTGCTCAAACGAAGATTCTTATTGCTGTTGTTAATCCTATTGTCTGGCATTTCGCTATTTGTTGGTGTCGGTGATGTCAG
TATCACAGGATTATTGGCGGGTAATGCAGCAGACTGGGAACTCTTTTGGACCAGTCGATTACCACGCTTAATGGCAATTT
TGGTGGCAGGGGCAGGTTTGAGTGTGTGTGGTTTAATCATGCAAACCCTAAGCCGTAATCGCTTTGTGTCACCCACCACA
GCAGGTTTATTTGATTGTGCACGATTGGGTGTGTTGATTGCGATTATTTTACTGCCAACTGCTTCGATTTTTGTCAAAAC
TTCATTTGCAATCATTATTACCTTAATCGGTGCCATGCTGTTTATGCAGATTTTGGCACGACTCAAACATCGAGATACGG
TATTTATTCCGTTGGTTGGGATGATTTTCGGGAGCATCATTTCAGCAGTCACGACATTTATTGCATTACAACTTGATCTT
TTACAAAGTCTTGCAGGGTGGTTGCAAGGTGATTTTTCCACCATTTTAAGTGGTAAATATGAACTGATTTACCTGAGCTT
ACCGATTTTGGCATTGGTTTATGTTTTTGCCAATCGCTTTATTTTGGCTGGTTTAGGTGATGATTTTGCCACAAATTTGG
GACTGAACTATCAGCAAACTTTATTCATTGGTTTATTACTGGTCTCAGTGATTACAGGTGTGGTGATTGTTACGGTTGGT
GTGATTCCATTTTTAGGTTTAATCGTGCCGAATATTGTCAGTCTATATTTGGGGGACAACATCCGTAAAACGCTGTCGCA
TACCGCTCTGTTAGGCGCGTTATTGGTTTTACTTTGTGATGTGTTTGGACGAATTGTGATTTTCCCGTATGAGGTGTCGA
TCAGTTTAATTATGGGTGTGTTAGGCAGTGCGATTTTCTTGTGGCTGTTGATCAGGAGTTATCGCCATGTCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-312)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S2FID3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

48.734

99.685

0.486

Multiple sequence alignment