Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | DIC78_RS09975 | Genome accession | NZ_CP029364 |
| Coordinates | 1964584..1964874 (+) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus halotolerans strain ZB201702 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
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Genomic Context
Location: 1959584..1969874
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DIC78_RS09960 (DIC78_09970) | - | 1959780..1961003 (-) | 1224 | WP_223203920.1 | G5 and 3D domain-containing protein | - |
| DIC78_RS09965 (DIC78_09975) | - | 1961249..1962016 (-) | 768 | WP_127696178.1 | TatD family hydrolase | - |
| DIC78_RS09970 (DIC78_09980) | metG | 1962093..1964087 (-) | 1995 | WP_127696180.1 | methionine--tRNA ligase | - |
| DIC78_RS09975 (DIC78_09985) | abrB | 1964584..1964874 (+) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| DIC78_RS09980 (DIC78_09990) | rsmI | 1964924..1965802 (-) | 879 | WP_059334656.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| DIC78_RS09985 (DIC78_09995) | - | 1965777..1966076 (-) | 300 | WP_010332689.1 | GIY-YIG nuclease family protein | - |
| DIC78_RS09990 (DIC78_10000) | - | 1966063..1966806 (-) | 744 | WP_106021672.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| DIC78_RS09995 (DIC78_10005) | yabA | 1966866..1967225 (-) | 360 | WP_010332687.1 | replication initiation-control protein YabA | - |
| DIC78_RS10000 (DIC78_10010) | ricT | 1967240..1968067 (-) | 828 | WP_010332686.1 | competence/sporulation regulator complex protein RicT | - |
| DIC78_RS10005 (DIC78_10015) | holB | 1968070..1969059 (-) | 990 | WP_127696182.1 | DNA polymerase III subunit delta' | - |
| DIC78_RS10010 (DIC78_10020) | - | 1969071..1969511 (-) | 441 | WP_024123606.1 | YaaR family protein | - |
| DIC78_RS10015 (DIC78_10025) | darA | 1969524..1969853 (-) | 330 | WP_003218295.1 | cyclic di-AMP receptor DarA | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=291971 DIC78_RS09975 WP_003226760.1 1964584..1964874(+) (abrB) [Bacillus halotolerans strain ZB201702]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=291971 DIC78_RS09975 WP_003226760.1 1964584..1964874(+) (abrB) [Bacillus halotolerans strain ZB201702]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCTGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTGATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATTTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGACGATAACCTTAAACTTGCTGGCGGCAAATTGGTACTAAGCAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |