Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | DIC78_RS04395 | Genome accession | NZ_CP029364 |
| Coordinates | 874820..875398 (-) | Length | 192 a.a. |
| NCBI ID | WP_024120818.1 | Uniprot ID | A0A7G7UAM4 |
| Organism | Bacillus halotolerans strain ZB201702 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 869820..880398
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DIC78_RS04370 (DIC78_04385) | - | 869870..871339 (+) | 1470 | WP_024120821.1 | sodium:solute symporter family protein | - |
| DIC78_RS04380 (DIC78_04395) | - | 872671..872940 (-) | 270 | WP_127695532.1 | excalibur calcium-binding domain-containing protein | - |
| DIC78_RS04385 (DIC78_04400) | - | 873153..874052 (+) | 900 | WP_106020596.1 | SDR family oxidoreductase | - |
| DIC78_RS04390 (DIC78_04405) | - | 874241..874660 (+) | 420 | WP_095713685.1 | hypothetical protein | - |
| DIC78_RS04395 (DIC78_04410) | comK | 874820..875398 (-) | 579 | WP_024120818.1 | competence transcription factor ComK | Regulator |
| DIC78_RS04400 (DIC78_04415) | - | 875691..875924 (+) | 234 | WP_106020598.1 | IDEAL domain-containing protein | - |
| DIC78_RS04405 (DIC78_04420) | - | 875953..876810 (-) | 858 | WP_059293097.1 | SDR family oxidoreductase | - |
| DIC78_RS04410 (DIC78_04425) | - | 876922..878451 (+) | 1530 | WP_127695534.1 | FAD-dependent oxidoreductase | - |
| DIC78_RS22125 | - | 878709..879086 (+) | 378 | Protein_885 | protoglobin domain-containing protein | - |
| DIC78_RS22130 | - | 879096..879890 (+) | 795 | WP_395939726.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22430.74 Da Isoelectric Point: 7.6610
>NTDB_id=291956 DIC78_RS04395 WP_024120818.1 874820..875398(-) (comK) [Bacillus halotolerans strain ZB201702]
MSQKTDAPLESYEVNSATIAVLPEEIDGKICSKIIEKDCMFYVSMKPLQIVDRSCRFFGSSYAGRKAGTYEVTKISHKPP
IMVDPSNQIFLFPTLSSTRPQCGWISHVHVKEFKPTEFDDTEVTFSNGKTMELPVSCNSFENQVYRTAWLRTKFQDRIEH
RVPKRQEFMLYPKEERTKMIYDFILRELGERY
MSQKTDAPLESYEVNSATIAVLPEEIDGKICSKIIEKDCMFYVSMKPLQIVDRSCRFFGSSYAGRKAGTYEVTKISHKPP
IMVDPSNQIFLFPTLSSTRPQCGWISHVHVKEFKPTEFDDTEVTFSNGKTMELPVSCNSFENQVYRTAWLRTKFQDRIEH
RVPKRQEFMLYPKEERTKMIYDFILRELGERY
Nucleotide
Download Length: 579 bp
>NTDB_id=291956 DIC78_RS04395 WP_024120818.1 874820..875398(-) (comK) [Bacillus halotolerans strain ZB201702]
ATGAGTCAGAAAACTGACGCACCATTAGAATCATATGAAGTAAACAGCGCAACAATTGCCGTTTTGCCAGAAGAAATCGA
CGGCAAAATCTGTTCGAAAATCATTGAAAAAGACTGTATGTTTTACGTCAGCATGAAGCCGCTGCAAATTGTCGACCGAA
GCTGCCGATTTTTCGGATCAAGCTACGCGGGAAGAAAAGCGGGAACTTATGAAGTGACAAAAATTTCTCACAAACCGCCA
ATCATGGTGGACCCTTCGAACCAAATCTTTTTATTCCCTACACTTTCTTCGACTAGACCCCAATGCGGCTGGATTTCCCA
TGTGCATGTAAAAGAATTCAAACCGACTGAATTCGACGATACGGAAGTGACGTTTTCAAACGGAAAAACGATGGAACTGC
CGGTCTCCTGCAATTCGTTCGAGAATCAGGTATACCGGACAGCCTGGCTCAGAACCAAATTTCAGGACAGAATCGAACAC
CGTGTCCCGAAACGGCAGGAATTTATGCTGTATCCGAAGGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGA
GCTTGGGGAGCGGTATTAG
ATGAGTCAGAAAACTGACGCACCATTAGAATCATATGAAGTAAACAGCGCAACAATTGCCGTTTTGCCAGAAGAAATCGA
CGGCAAAATCTGTTCGAAAATCATTGAAAAAGACTGTATGTTTTACGTCAGCATGAAGCCGCTGCAAATTGTCGACCGAA
GCTGCCGATTTTTCGGATCAAGCTACGCGGGAAGAAAAGCGGGAACTTATGAAGTGACAAAAATTTCTCACAAACCGCCA
ATCATGGTGGACCCTTCGAACCAAATCTTTTTATTCCCTACACTTTCTTCGACTAGACCCCAATGCGGCTGGATTTCCCA
TGTGCATGTAAAAGAATTCAAACCGACTGAATTCGACGATACGGAAGTGACGTTTTCAAACGGAAAAACGATGGAACTGC
CGGTCTCCTGCAATTCGTTCGAGAATCAGGTATACCGGACAGCCTGGCTCAGAACCAAATTTCAGGACAGAATCGAACAC
CGTGTCCCGAAACGGCAGGAATTTATGCTGTATCCGAAGGAAGAGCGGACGAAGATGATTTATGATTTTATTTTGCGTGA
GCTTGGGGAGCGGTATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
96.354 |
100 |
0.964 |