Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   DIC78_RS03925 Genome accession   NZ_CP029364
Coordinates   782027..782218 (-) Length   63 a.a.
NCBI ID   WP_127695478.1    Uniprot ID   -
Organism   Bacillus halotolerans strain ZB201702     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 777027..787218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DIC78_RS03900 (DIC78_03910) appD 777361..778347 (-) 987 WP_127695472.1 oligopeptide ABC transporter ATP-binding protein AppD -
  DIC78_RS03905 (DIC78_03915) - 778537..779322 (-) 786 WP_127695474.1 DUF2268 domain-containing protein -
  DIC78_RS03910 (DIC78_03920) fabF 779402..780640 (-) 1239 WP_127695476.1 beta-ketoacyl-ACP synthase II -
  DIC78_RS03915 (DIC78_03925) fabH 780663..781601 (-) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  DIC78_RS03920 (DIC78_03930) - 781767..781997 (+) 231 WP_081638273.1 hypothetical protein -
  DIC78_RS03925 (DIC78_03935) comZ 782027..782218 (-) 192 WP_127695478.1 ComG operon transcriptional repressor ComZ Regulator
  DIC78_RS03930 (DIC78_03940) med 782233..783186 (-) 954 WP_024120903.1 BMP family ABC transporter substrate-binding protein Regulator
  DIC78_RS03935 (DIC78_03945) - 783277..783840 (-) 564 WP_106022355.1 hypothetical protein -
  DIC78_RS03940 (DIC78_03950) - 783923..784660 (-) 738 WP_024120901.1 hypothetical protein -
  DIC78_RS03945 (DIC78_03955) - 784919..785104 (+) 186 WP_010333727.1 YjzD family protein -
  DIC78_RS03950 (DIC78_03960) - 785150..785329 (-) 180 WP_003239319.1 YjzC family protein -
  DIC78_RS03955 (DIC78_03965) argF 785415..786372 (-) 958 Protein_792 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7244.30 Da        Isoelectric Point: 4.2564

>NTDB_id=291952 DIC78_RS03925 WP_127695478.1 782027..782218(-) (comZ) [Bacillus halotolerans strain ZB201702]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMTEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=291952 DIC78_RS03925 WP_127695478.1 782027..782218(-) (comZ) [Bacillus halotolerans strain ZB201702]
ATGCAGCACGAAAAATCACTTGAGTTTCTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGACGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterProScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984

Multiple sequence alignment