Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   DIC78_RS02270 Genome accession   NZ_CP029364
Coordinates   491237..491812 (-) Length   191 a.a.
NCBI ID   WP_024121230.1    Uniprot ID   A0A9Q4HNH0
Organism   Bacillus halotolerans strain ZB201702     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 486237..496812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DIC78_RS02245 (DIC78_02270) mobB 486635..487156 (-) 522 WP_127695329.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  DIC78_RS02250 (DIC78_02275) glp 487117..488409 (-) 1293 WP_127695331.1 gephyrin-like molybdotransferase Glp -
  DIC78_RS02255 (DIC78_02280) - 488427..489446 (-) 1020 WP_106022216.1 MoeB/ThiF family adenylyltransferase -
  DIC78_RS02260 (DIC78_02285) - 489498..490097 (-) 600 WP_103671625.1 molybdenum cofactor guanylyltransferase -
  DIC78_RS02265 (DIC78_02290) - 490230..491195 (+) 966 WP_024121231.1 hypothetical protein -
  DIC78_RS02270 (DIC78_02295) rok 491237..491812 (-) 576 WP_024121230.1 transcriptional regulator Rok Regulator
  DIC78_RS02275 (DIC78_02300) ykuV 492264..492722 (-) 459 WP_103671624.1 thiol-disulfide oxidoreductase YkuV -
  DIC78_RS02280 (DIC78_02305) ahpA 492804..493346 (-) 543 WP_010334066.1 biofilm-specific peroxidase AhpA -
  DIC78_RS02285 (DIC78_02310) - 493591..494394 (+) 804 WP_024121228.1 mechanosensitive ion channel family protein -
  DIC78_RS02290 (DIC78_02315) - 494429..494674 (-) 246 WP_010334064.1 YkuS family protein -
  DIC78_RS02295 (DIC78_02320) - 494735..495859 (-) 1125 WP_106020381.1 N-acetyldiaminopimelate deacetylase -
  DIC78_RS02300 (DIC78_02325) dapD 495930..496640 (-) 711 WP_024121226.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21761.69 Da        Isoelectric Point: 9.8783

>NTDB_id=291943 DIC78_RS02270 WP_024121230.1 491237..491812(-) (rok) [Bacillus halotolerans strain ZB201702]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSTSETKKEFRSERKTDSLPVLAELAAQEIRSYQPPS
QQQSAQPQLQSISSLPAGIPDGATRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGDIESAESATE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=291943 DIC78_RS02270 WP_024121230.1 491237..491812(-) (rok) [Bacillus halotolerans strain ZB201702]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTAAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCACTTCCGAAACGAAAAAGGAGTTCC
GTTCTGAAAGAAAAACTGACTCTCTGCCAGTTCTCGCCGAGCTTGCAGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCCGCCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGATGGAGCGACTAGAAGAAG
AAGAGGAACGGCAAGACCGGGATCTAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAGAGCTCCGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGTGACATCGAATCAGCTGA
ATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

94.764

100

0.948

Multiple sequence alignment