Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   DIW83_RS03445 Genome accession   NZ_CP029351
Coordinates   691676..696199 (+) Length   1507 a.a.
NCBI ID   WP_016804664.1    Uniprot ID   A0A2L1VD37
Organism   Acinetobacter nosocomialis strain NCTC 8102     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 686676..701199
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DIW83_RS03420 (DIW83_03420) - 687113..687751 (-) 639 WP_016804665.1 hypothetical protein -
  DIW83_RS03425 (DIW83_03425) pilG 688034..688417 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  DIW83_RS03430 (DIW83_03430) - 688444..688806 (+) 363 WP_002051151.1 PleD family two-component system response regulator -
  DIW83_RS03435 (DIW83_03435) - 688864..689400 (+) 537 WP_002051357.1 chemotaxis protein CheW -
  DIW83_RS03440 (DIW83_03440) - 689447..691528 (+) 2082 WP_004885376.1 methyl-accepting chemotaxis protein -
  DIW83_RS03445 (DIW83_03445) chpA 691676..696199 (+) 4524 WP_016804664.1 hybrid sensor histidine kinase/response regulator Regulator
  DIW83_RS03450 (DIW83_03450) - 696196..696663 (+) 468 WP_016804663.1 hypothetical protein -
  DIW83_RS03455 (DIW83_03455) dapE 696913..698046 (-) 1134 WP_004885383.1 succinyl-diaminopimelate desuccinylase -
  DIW83_RS03460 (DIW83_03460) - 698172..698315 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  DIW83_RS03465 (DIW83_03465) - 698428..699321 (-) 894 WP_016804662.1 DUF1853 family protein -
  DIW83_RS03470 (DIW83_03470) - 699426..699794 (+) 369 WP_002051275.1 YbaN family protein -
  DIW83_RS03475 (DIW83_03475) elsL 700005..700508 (+) 504 WP_000077301.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1507 a.a.        Molecular weight: 171562.08 Da        Isoelectric Point: 4.3392

>NTDB_id=291896 DIW83_RS03445 WP_016804664.1 691676..696199(+) (chpA) [Acinetobacter nosocomialis strain NCTC 8102]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETMTGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIRDSLELLSKHSSNEQLEARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPASVEPLFNIEP
EPEAAVTLENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSPLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQTSNFQPVPVVEVFDSESEIFSEQELISEVLIDEVPAEIEPVLTELEVHDDQMVFDNVVAELATPVEAITSVTSQENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKTDLFSSEPVMTFIQGDGTEPPPM
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQKANKPEAGRIELNIQRQGTD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEEQDILQLIFHPGLSTAEQITQISGRGVGLDVVQSDIKALGGHVSVD
SIYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLNETVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=291896 DIW83_RS03445 WP_016804664.1 691676..696199(+) (chpA) [Acinetobacter nosocomialis strain NCTC 8102]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATTTTCGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGATGCAGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCACACTTTAAAGGGTTCTGGAAGAATGATCGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTTAATCGCGTAATCAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATGACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGACGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCGCAGGTCGAAACAATTTTTGAAGCAAGTACCAAAGTTGAGCACTTATTTAAAATACTATTGCA
AGAAGAACTCTCTTCTAACTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAGAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGAAGCTCGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACACCTTCTCATGGTTTGGTATCACAACTGTTGTTGTTAGATGTTTCTGAATTATT
AGATGCAGAGTTAGATTTTGAGAAAGGCATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TACTGTTACAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTTCACAATGACCTATCTCAGCAAGATCCTGCTTCTGTTGAGCCACTATTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGTTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGTCAGAGTGTACAGCAAGA
TCGCCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTTCTTGAAGAGGCTGATG
AGCTACTTGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCCTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTAGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCACCTTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGACTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAACGCGTTAAAACGAGCA
GGTCAAACCTCTAACTTCCAACCTGTACCAGTGGTTGAAGTATTTGATAGTGAAAGTGAGATCTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCGATGAAGTACCGGCAGAAATTGAGCCTGTTCTTACAGAATTAGAAGTTCATGATGATCAGA
TGGTATTTGATAACGTTGTTGCTGAGTTAGCTACGCCAGTTGAAGCAATAACATCTGTTACATCACAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGTAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTTAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCA
CTGCATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAGCATTTCGATGGATTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCGGCTA
AGTTAACGAAAACTGATTTGTTTAGTTCAGAACCTGTGATGACCTTCATACAAGGTGATGGTACAGAACCACCACCAATG
ATGGGCGCATGGGAGCAAACAGAACGTCTGGATCAGAACAATGAAATGATCCGTGTTTCAGCAGACTTGATCGAGAAGAT
GATTGACTTGTCTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGACTTGAGCCAGTTCGGTCATACATTGGTTG
AAATGGAATTAGCTATTCAACGACTGGCCGATCAGTTACGACGAATGGAAGGCGAGTTAGAAACACAAATTATTGCTAAA
CACGGTATTGAGCATTCTCGCTATACCGAATTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAACCAGTTATCGAA
ATCTCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTCACAAGATCAGAGATACAGAAAGTTTGC
TTTTACAACAGTCGCGTATTCAGGCAGAAATTCAAGAAGGCTTGATGCGAACGCGATTGGTTCCATTTTCACGTTTGTTA
CCGCGTTTGCAGCGAATTGTGCGTCAAACATCTACAGCCTTGAATAGACCTGCTGAGCTTTTCGTAAATAATACCGAAGG
TGAGTTAGACCGTAACATTTTAGAACGCTTAGTGACACCACTCGAGCACATGCTCAGAAATGCAATTGACCATGGTCTAG
AAGACCGGGCACAGCGCCAAAAGGCGAATAAACCGGAAGCAGGGCGTATTGAACTGAACATTCAGCGTCAAGGAACAGAC
GTTGTTGTTGTCTTTAGCGATGATGGACAAGGTATTGATGTAGAAAAAGTCCGCCAAAAAGCACTGCTTGCTGGTCTGAT
CAAGCCAGAACAAGATTTAGAAGAGCAAGATATTCTACAGCTAATTTTCCATCCAGGTTTAAGTACCGCAGAACAGATTA
CTCAGATTTCTGGACGTGGTGTTGGTCTGGATGTCGTACAGAGCGATATTAAAGCTTTAGGTGGACATGTTAGCGTTGAC
TCTATTTATGGTAAGGGAACAACATTTACGATACGTGTACCGACTACTGTAGCTGTAAGTGATGCCTTAATGGTAAAAGT
GGCAGATCAGCAATTTGCAATTCCACTTGCTCAAATTGATCGAATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGTCCTAAAGAACTATTTGAATATGAAAATAAGCGTTATCCATTACGTTATCTTTCAGAATTTGTTGGTAATCAA
CCAATGCCACGACTAAATGGCATGATGTATTCATTACCTGTCTTGATGATTAAAGCCAACAATGGTCAAACTGTGGCGTT
ACTTGTCGATCAGTTAATTGGTTCTCGAGCTCAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGAGCAA
TTGCAGGTGCGACCATCTTAGGTGATGGACAGGTTTGTTTAATTTTAGATGGACAAAATATTGCGCGACAAATTCAGTCC
ACACCGCGTCATAAACAGCTCAATGAAACAGTATATAGACAACGTGAATCAGACGAGCGCCGTCTCGTTATGATTGTCGA
TGACTCCGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGCG
TTGATGCCATAGAACAGCTAGAAAATATTAAGCCAGATTTGATGCTGCTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGTGAAAA
ACATCGTGAACGGGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCGTTCCAAGAAGAAGAGTTACTAGAAAATA
TTGATGCTTTACTTGTAGCATTTGAAAGTGAGGTCAAATCATGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1079-1215)

Hpt domain (Hpt)

(523-612)

Hpt domain (Hpt)

(25-106)

Hpt domain (Hpt)

(733-797)

Hpt domain (Hpt)

(199-282)

Response regulator receiver domain (Response_reg)

(1383-1494)

CheW-like domain (CheW)

(1222-1357)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.502

100

0.925

Multiple sequence alignment