Detailed information NTG0029181

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CCC13826_RS07465
• Genome accession: NC_009802
• Coordinates: 1486354..1487307 (+)
• Length: 317 a.a.
• NCBI ID: WP_012140211.1
• Uniprot ID: A7ZEW2
• Organism: Campylobacter concisus 13826
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1481354..1492307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCC13826_RS07440 (CCC13826_0474)	-	1481443..1482516 (+)	1074	WP_012140206.1	glycosyltransferase family 4 protein	-
CCC13826_RS07445 (CCC13826_0475)	-	1482513..1483310 (+)	798	WP_012140207.1	polysaccharide deacetylase family protein	-
CCC13826_RS07450 (CCC13826_0476)	-	1483320..1484090 (-)	771	WP_012140208.1	polysaccharide deacetylase family protein	-
CCC13826_RS07455 (CCC13826_0477)	-	1484087..1485136 (-)	1050	WP_012140209.1	glycosyltransferase	-
CCC13826_RS07460 (CCC13826_0478)	-	1485326..1486357 (+)	1032	WP_012140210.1	glycosyltransferase family 4 protein	-
CCC13826_RS07465 (CCC13826_0479)	waaF	1486354..1487307 (+)	954	WP_012140211.1	lipopolysaccharide heptosyltransferase II	Regulator
CCC13826_RS10640 (CCC13826_0480)	-	1487351..1487608 (-)	258	WP_257639680.1	SelT/SelW/SelH family (seleno)protein	-
CCC13826_RS07470 (CCC13826_0481)	-	1487690..1488241 (+)	552	WP_012140212.1	DJ-1 family glyoxalase III	-
CCC13826_RS07475 (CCC13826_0482)	-	1488467..1488712 (+)	246	WP_009294719.1	RNA recognition motif domain-containing protein	-
CCC13826_RS07480 (CCC13826_0484)	-	1488690..1489583 (+)	894	WP_048809858.1	glutamate--tRNA ligase family protein	-
CCC13826_RS07485 (CCC13826_0483)	-	1489569..1490276 (-)	708	WP_012140214.1	DUF6882 domain-containing protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35356.51 Da
• Isoelectric Point: 10.0298

>NTDB_id=29181 CCC13826_RS07465 WP_012140211.1 1486354..1487307(+) (waaF) [Campylobacter concisus 13826]
MRVFIELPTWLGDSVMASAAIENLVQNEKNLQIVFFGSFIACELYKSHPNCEKVVVDESKKAKFRFLSLAKSAKSLGKFD
LALSFRSSFASKFLIFFINAKKKAIFKKSKTVLHQVLKYANFVKNALGLGEISTQLKLHFTPQISAKKTLALNPGASYGS
AKRWYPEYFAQVALNFKNEFEIVIFGGKGEQEICEKIEQILKENGATCQNLVGKTSVKELCGRIAGLRQNGIFVTNDSGP
MHVAAAFHVPTIALFGPTKFSETSPWGNEFAKIVHLNLACMPCMKRVCPLKTHACMRELKSQMVIDEINLLRKESGI

Nucleotide

• Length: 954 bp

>NTDB_id=29181 CCC13826_RS07465 WP_012140211.1 1486354..1487307(+) (waaF) [Campylobacter concisus 13826]
ATGAGAGTTTTTATCGAGCTTCCAACCTGGCTAGGTGATAGCGTGATGGCAAGCGCTGCGATAGAAAATTTGGTGCAAAA
TGAGAAGAATTTACAAATCGTTTTTTTTGGCTCATTTATAGCCTGCGAGCTTTATAAAAGCCATCCAAACTGCGAAAAAG
TTGTCGTTGATGAGAGTAAAAAAGCTAAATTTAGGTTTTTATCTCTTGCAAAAAGCGCAAAAAGTCTTGGCAAATTTGAT
CTAGCTCTTAGCTTTAGAAGCTCGTTTGCTAGTAAATTTTTGATATTTTTTATAAACGCTAAGAAAAAAGCCATCTTTAA
AAAGAGTAAAACCGTCCTTCATCAGGTGCTAAAATATGCAAATTTTGTAAAAAATGCCCTTGGCTTGGGCGAAATTTCTA
CTCAGTTAAAGCTACATTTTACACCTCAAATTTCAGCTAAAAAAACACTGGCTCTAAATCCAGGTGCGAGCTACGGAAGT
GCAAAAAGATGGTATCCAGAGTATTTTGCACAGGTGGCTTTAAATTTCAAAAATGAGTTTGAGATCGTAATCTTTGGTGG
CAAAGGCGAGCAAGAAATTTGTGAAAAAATTGAGCAAATTTTAAAAGAAAACGGCGCAACTTGCCAAAATTTAGTTGGCA
AAACAAGCGTCAAAGAGCTTTGTGGGCGCATAGCTGGGCTTAGACAAAATGGCATTTTCGTCACAAACGATAGCGGTCCT
ATGCACGTAGCTGCCGCCTTTCATGTGCCAACAATCGCTCTTTTTGGACCGACAAAATTTAGCGAAACCTCGCCATGGGG
AAATGAATTTGCAAAGATAGTGCATCTAAATTTAGCTTGCATGCCCTGTATGAAGCGAGTTTGCCCACTAAAAACGCATG
CTTGCATGAGAGAGCTAAAGTCCCAAATGGTGATAGATGAGATAAATTTACTAAGAAAAGAGAGTGGGATTTAG

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (122-292)

3D structure

• AlphaFold DB: A7ZEW2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.624	100	0.502