Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DIR46_RS17215 Genome accession   NZ_CP029343
Coordinates   3772187..3772582 (+) Length   131 a.a.
NCBI ID   WP_109346326.1    Uniprot ID   A0A2S2DKV3
Organism   Massilia oculi strain CCUG 43427     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3767187..3777582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DIR46_RS17190 (DIR46_17190) mtgA 3767779..3768495 (+) 717 WP_109346322.1 monofunctional biosynthetic peptidoglycan transglycosylase -
  DIR46_RS17195 (DIR46_17195) corA 3768595..3769560 (+) 966 WP_109346323.1 magnesium/cobalt transporter CorA -
  DIR46_RS17200 (DIR46_17200) hemL 3769618..3770916 (-) 1299 WP_109346324.1 glutamate-1-semialdehyde 2,1-aminomutase -
  DIR46_RS17205 (DIR46_17205) - 3770963..3771772 (-) 810 WP_109346325.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  DIR46_RS17210 (DIR46_17210) - 3771871..3772023 (+) 153 WP_040775196.1 rubredoxin -
  DIR46_RS17215 (DIR46_17215) pilG 3772187..3772582 (+) 396 WP_109346326.1 PleD family two-component system response regulator Regulator
  DIR46_RS17220 (DIR46_17220) - 3772613..3772999 (+) 387 WP_109346327.1 PleD family two-component system response regulator -
  DIR46_RS17225 (DIR46_17225) - 3772996..3773541 (+) 546 WP_109346328.1 chemotaxis protein CheW -
  DIR46_RS17230 (DIR46_17230) - 3773602..3775869 (+) 2268 WP_109346329.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14258.52 Da        Isoelectric Point: 7.8822

>NTDB_id=291803 DIR46_RS17215 WP_109346326.1 3772187..3772582(+) (pilG) [Massilia oculi strain CCUG 43427]
MTTSPQSPALTIMVIDDSSTIRRSAEIFLNQAGYQVVLADDGFDALAKINDHHPALVFCDILMPRLDGYQTCALIKKSAR
FRATPVLMLSSKDGLFDRARGAMVGASAYLTKPFTKDSLLAAVREHAMPQA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=291803 DIR46_RS17215 WP_109346326.1 3772187..3772582(+) (pilG) [Massilia oculi strain CCUG 43427]
ATGACGACATCGCCGCAATCCCCGGCCCTGACCATCATGGTGATCGACGACAGCAGCACGATCCGCCGCTCCGCCGAGAT
TTTCCTGAACCAGGCCGGTTACCAGGTGGTGTTGGCCGACGACGGCTTCGACGCCCTGGCCAAGATCAACGACCATCATC
CGGCGCTGGTGTTCTGCGACATCCTGATGCCGCGCCTGGACGGTTACCAGACCTGCGCGCTGATCAAGAAGAGCGCGCGC
TTTCGCGCGACGCCGGTCCTGATGCTGTCGTCCAAGGACGGCCTGTTCGACCGCGCGCGCGGCGCGATGGTCGGCGCCAG
CGCCTATCTCACCAAACCCTTTACCAAAGACAGCCTGCTGGCGGCGGTGCGCGAGCACGCCATGCCCCAGGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2S2DKV3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

61.864

90.076

0.557

Multiple sequence alignment