Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DGM85_RS06415 Genome accession   NZ_CP029280
Coordinates   1505661..1506062 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas phaseoli pv. phaseoli strain Px100     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1500661..1511062
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DGM85_RS06395 (DGM85_06725) tsaB 1501623..1502342 (+) 720 WP_017155557.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  DGM85_RS06400 (DGM85_06730) - 1502339..1503256 (+) 918 WP_039567991.1 ADP-ribosylglycohydrolase family protein -
  DGM85_RS06405 (DGM85_06735) - 1503602..1504477 (-) 876 WP_039567989.1 energy transducer TonB -
  DGM85_RS06410 (DGM85_06740) gshB 1504474..1505424 (-) 951 WP_039567988.1 glutathione synthase -
  DGM85_RS06415 (DGM85_06745) pilG 1505661..1506062 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  DGM85_RS06420 (DGM85_06750) - 1506080..1506442 (+) 363 WP_005913708.1 response regulator -
  DGM85_RS06425 (DGM85_06755) - 1506442..1506972 (+) 531 WP_039567986.1 chemotaxis protein CheW -
  DGM85_RS06430 (DGM85_06760) - 1507012..1509048 (+) 2037 WP_039567984.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=291590 DGM85_RS06415 WP_005913706.1 1505661..1506062(+) (pilG) [Xanthomonas phaseoli pv. phaseoli strain Px100]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=291590 DGM85_RS06415 WP_005913706.1 1505661..1506062(+) (pilG) [Xanthomonas phaseoli pv. phaseoli strain Px100]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGATGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment