Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DGN02_RS15930 Genome accession   NZ_CP029273
Coordinates   3746270..3746671 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas citri strain T21     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3741270..3751671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DGN02_RS15915 (DGN02_16520) - 3743284..3745320 (-) 2037 WP_007967140.1 methyl-accepting chemotaxis protein -
  DGN02_RS15920 (DGN02_16525) - 3745360..3745890 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  DGN02_RS15925 (DGN02_16530) - 3745890..3746252 (-) 363 WP_005913708.1 response regulator -
  DGN02_RS15930 (DGN02_16535) pilG 3746270..3746671 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  DGN02_RS15935 (DGN02_16540) gshB 3746908..3747858 (+) 951 WP_099804484.1 glutathione synthase -
  DGN02_RS15940 (DGN02_16545) - 3747855..3748730 (+) 876 WP_089095776.1 energy transducer TonB -
  DGN02_RS15945 (DGN02_16550) - 3749019..3749933 (-) 915 WP_099804485.1 ADP-ribosylglycohydrolase family protein -
  DGN02_RS15950 (DGN02_16555) tsaB 3749930..3750655 (-) 726 WP_099804486.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=291535 DGN02_RS15930 WP_005913706.1 3746270..3746671(-) (pilG) [Xanthomonas citri strain T21]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=291535 DGN02_RS15930 WP_005913706.1 3746270..3746671(-) (pilG) [Xanthomonas citri strain T21]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment