Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   DGN11_RS07390 Genome accession   NZ_CP029267
Coordinates   1672628..1673029 (+) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas citri pv. fuscans strain M12     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1667628..1678029
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DGN11_RS07370 (DGN11_07755) tsaB 1668646..1669371 (+) 726 WP_007973968.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  DGN11_RS07375 (DGN11_07760) - 1669368..1670282 (+) 915 WP_042826822.1 ADP-ribosylglycohydrolase family protein -
  DGN11_RS07380 (DGN11_07765) - 1670569..1671444 (-) 876 WP_022558747.1 energy transducer TonB -
  DGN11_RS07385 (DGN11_07770) gshB 1671441..1672391 (-) 951 WP_039731906.1 glutathione synthase -
  DGN11_RS07390 (DGN11_07775) pilG 1672628..1673029 (+) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  DGN11_RS07395 (DGN11_07780) - 1673047..1673409 (+) 363 WP_005913708.1 response regulator -
  DGN11_RS07400 (DGN11_07785) - 1673409..1673939 (+) 531 WP_003482487.1 chemotaxis protein CheW -
  DGN11_RS07405 (DGN11_07790) - 1673980..1676016 (+) 2037 WP_007967140.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=291499 DGN11_RS07390 WP_005913706.1 1672628..1673029(+) (pilG) [Xanthomonas citri pv. fuscans strain M12]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=291499 DGN11_RS07390 WP_005913706.1 1672628..1673029(+) (pilG) [Xanthomonas citri pv. fuscans strain M12]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTCATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTGATCATGTTGTCGTCCAAGGACGGCCTGTTCGACAAGGCACGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTACTGAGCGCGATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment