Detailed information NTG0291476

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: DGN16_RS08915
• Genome accession: NZ_CP029264
• Coordinates: 2006331..2007365 (+)
• Length: 344 a.a.
• NCBI ID: WP_003481871.1
• Uniprot ID: A0A7Z7J0F3
• Organism: Xanthomonas citri pv. fuscans strain PR8F
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2001331..2012365

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DGN16_RS08900 (DGN16_09255)	-	2002826..2003320 (+)	495	WP_003481865.1	CinA family protein	-
DGN16_RS08905 (DGN16_09260)	ubiB	2003753..2005429 (+)	1677	WP_022559539.1	2-polyprenylphenol 6-hydroxylase	-
DGN16_RS08910 (DGN16_09265)	lexA	2005517..2006158 (+)	642	WP_007966767.1	transcriptional repressor LexA	-
DGN16_RS08915 (DGN16_09270)	recA	2006331..2007365 (+)	1035	WP_003481871.1	recombinase RecA	Machinery gene
DGN16_RS08920 (DGN16_09280)	recX	2007663..2008151 (+)	489	WP_007966764.1	recombination regulator RecX	-
DGN16_RS08925 (DGN16_09285)	alaS	2008253..2010901 (+)	2649	WP_022559538.1	alanine--tRNA ligase	-
DGN16_RS08930 (DGN16_09290)	csrA	2011041..2011253 (+)	213	WP_003481884.1	carbon storage regulator CsrA	-

Sequence

Protein

• Length: 344 a.a.
• Molecular weight: 37176.66 Da
• Isoelectric Point: 4.9759

>NTDB_id=291476 DGN16_RS08915 WP_003481871.1 2006331..2007365(+) (recA) [Xanthomonas citri pv. fuscans strain PR8F]
MDENKKRALSAALSQIEKQFGKGSVMRMGDRVIEAVEVIPTGSLMLDIALGIGGLPKGRVVEIYGPESSGKTTLTLQAIA
ECQKNGGTAAFIDAEHALDPIYAAKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSVDIVVVDSVAALTPKAEIEGEMGD
QLPGLQARLMSQALRKLTGNIKRSNTLVVFINQLRMKIGVMMPGQSPEVTTGGNALKFYASVRLDIRRIGAIKKGDEIIG
NQTKIKVVKNKLAPPFKQVVTEILYGEGISREGELIDMGVEAKLVDKAGAWYSYGDERIGQGKDNARTYLRDNPQVATRL
EAELREKFQPAEAPREAGDDEDKE

Nucleotide

• Length: 1035 bp

>NTDB_id=291476 DGN16_RS08915 WP_003481871.1 2006331..2007365(+) (recA) [Xanthomonas citri pv. fuscans strain PR8F]
ATGGACGAGAACAAGAAGCGCGCCCTTTCCGCCGCACTGAGCCAGATCGAAAAGCAATTCGGCAAGGGCTCGGTCATGCG
CATGGGCGACCGCGTCATTGAGGCGGTCGAAGTCATCCCCACCGGCTCGCTGATGCTGGATATCGCCCTGGGGATCGGCG
GCCTGCCGAAGGGCCGCGTGGTCGAAATCTACGGCCCGGAATCCTCCGGCAAGACTACCTTGACCCTGCAAGCCATCGCC
GAGTGCCAGAAGAACGGCGGCACCGCTGCCTTCATCGATGCCGAGCACGCACTGGACCCGATTTATGCGGCCAAGCTGGG
CGTCAATGTCGACGACCTGCTGCTGTCGCAGCCGGATACCGGTGAGCAGGCACTGGAAATTGCCGACATGCTGGTGCGCT
CGGGTTCGGTTGATATCGTGGTGGTCGACTCGGTCGCTGCACTGACGCCGAAGGCAGAAATCGAAGGCGAGATGGGCGAC
CAGCTGCCAGGTTTGCAGGCTCGCCTGATGAGCCAGGCGCTGCGCAAGCTCACCGGCAATATCAAGCGCTCCAACACGCT
GGTGGTCTTCATCAATCAGCTGCGCATGAAGATCGGCGTCATGATGCCTGGCCAGAGCCCGGAAGTGACCACCGGCGGCA
ACGCGCTGAAGTTCTACGCCTCGGTGCGTCTGGATATCCGCCGTATCGGTGCGATCAAGAAGGGCGACGAGATCATCGGT
AACCAGACCAAGATCAAAGTGGTCAAGAACAAGCTGGCGCCTCCGTTCAAGCAGGTCGTGACCGAAATCCTGTATGGCGA
AGGCATCAGTCGCGAGGGCGAATTGATCGACATGGGCGTGGAAGCCAAGCTGGTCGACAAGGCCGGCGCTTGGTACAGCT
ACGGCGATGAGCGCATCGGGCAGGGCAAGGACAACGCGCGAACCTACCTGCGCGACAACCCACAGGTTGCGACCCGGCTG
GAAGCGGAGCTGCGTGAGAAGTTCCAACCTGCCGAAGCACCGCGTGAGGCCGGCGACGACGAAGACAAGGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (7-270)

3D structure

• AlphaFold DB: A0A7Z7J0F3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Acinetobacter baylyi ADP1	70.64	100	0.706
recA	Pseudomonas stutzeri DSM 10701	70.623	97.965	0.692
recA	Acinetobacter baumannii D1279779	71.951	95.349	0.686
recA	Ralstonia pseudosolanacearum GMI1000	75.399	90.988	0.686
recA	Vibrio cholerae strain A1552	70.859	94.767	0.672
recA	Vibrio cholerae O1 biovar El Tor strain E7946	70.859	94.767	0.672
recA	Neisseria gonorrhoeae MS11	69.018	94.767	0.654
recA	Neisseria gonorrhoeae MS11	69.018	94.767	0.654
recA	Neisseria gonorrhoeae strain FA1090	69.018	94.767	0.654
recA	Glaesserella parasuis strain SC1401	65.116	100	0.651
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	63.473	97.093	0.616
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	61.337	100	0.613
recA	Latilactobacillus sakei subsp. sakei 23K	62.275	97.093	0.605
recA	Helicobacter pylori strain NCTC11637	62.048	96.512	0.599
recA	Helicobacter pylori 26695	61.747	96.512	0.596
recA	Bacillus subtilis subsp. subtilis str. 168	62.769	94.477	0.593
recA	Streptococcus pneumoniae Rx1	61.28	95.349	0.584
recA	Streptococcus mitis SK321	61.28	95.349	0.584
recA	Streptococcus pneumoniae D39	61.28	95.349	0.584
recA	Streptococcus pneumoniae R6	61.28	95.349	0.584
recA	Streptococcus pneumoniae TIGR4	61.28	95.349	0.584
recA	Streptococcus mitis NCTC 12261	60.976	95.349	0.581
recA	Streptococcus pyogenes NZ131	60.606	95.93	0.581
recA	Streptococcus mutans UA159	60.303	95.93	0.578
recA	Lactococcus lactis subsp. cremoris KW2	59.385	94.477	0.561
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	58.485	95.93	0.561