Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   DG474_RS08340 Genome accession   NZ_CP029257
Coordinates   1745793..1747562 (-) Length   589 a.a.
NCBI ID   WP_042902927.1    Uniprot ID   A0A081R397
Organism   Streptococcus oralis strain CCUG 53468     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1740793..1752562
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DG474_RS08310 (DG474_08450) - 1741391..1741756 (-) 366 WP_042902923.1 Asp23/Gls24 family envelope stress response protein -
  DG474_RS08315 (DG474_08455) rpmB 1741909..1742097 (-) 189 WP_001140948.1 50S ribosomal protein L28 -
  DG474_RS08320 (DG474_08460) - 1742202..1742876 (-) 675 WP_009729740.1 hypothetical protein -
  DG474_RS08325 (DG474_08465) - 1742882..1743328 (-) 447 WP_042902924.1 LytTR family DNA-binding domain-containing protein -
  DG474_RS08330 (DG474_08470) - 1743442..1743945 (-) 504 WP_042902925.1 phosphatase PAP2 family protein -
  DG474_RS08335 (DG474_08475) rcrQ 1744043..1745803 (-) 1761 WP_255778068.1 ABC transporter ATP-binding protein Regulator
  DG474_RS08340 (DG474_08480) rcrP 1745793..1747562 (-) 1770 WP_042902927.1 ABC transporter ATP-binding protein Regulator
  DG474_RS08345 (DG474_08485) - 1747546..1748007 (-) 462 WP_084859619.1 MarR family winged helix-turn-helix transcriptional regulator -
  DG474_RS08350 (DG474_08490) - 1748200..1748904 (+) 705 WP_255778070.1 CD20-like domain-containing protein -
  DG474_RS08355 (DG474_08495) - 1748954..1749670 (-) 717 WP_044021424.1 YebC/PmpR family DNA-binding transcriptional regulator -
  DG474_RS08360 (DG474_08500) - 1749767..1751137 (-) 1371 WP_255778071.1 MATE family efflux transporter -
  DG474_RS08365 (DG474_08505) - 1751247..1751801 (+) 555 WP_070656881.1 GNAT family N-acetyltransferase -
  DG474_RS08370 (DG474_08510) - 1751931..1752125 (-) 195 WP_255778072.1 PspC domain-containing protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65376.83 Da        Isoelectric Point: 6.6285

>NTDB_id=291437 DG474_RS08340 WP_042902927.1 1745793..1747562(-) (rcrP) [Streptococcus oralis strain CCUG 53468]
MKKLAKRITGKEWGMIILTILFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVMVGFFAA
RVAASYTTHLRRDVFHRVLDFSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQKLTDKLNSITRESLTGIRVVRAYNAEDYQDKKFEAANDEVTRLNLFVNRLMAI
MNPIMMAISSGLSLAIYWIGAYIINDASLAERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DGVNVQDYDLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSKETPLSEAAMWQALELAQSKAFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLATNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=291437 DG474_RS08340 WP_042902927.1 1745793..1747562(-) (rcrP) [Streptococcus oralis strain CCUG 53468]
ATGAAGAAACTCGCTAAACGTATTACAGGAAAAGAGTGGGGAATGATTATCCTTACGATTCTGTTCACTTGTTTCTCGGT
CTATCTCGAGTTAGAGGTACCGACTTACATTTCGCAAATTACAGAATTACTGGGAACGTCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGATTGTCTTTATTGGCTTTCTTTTCATCTGTTATGGTTGGTTTCTTTGCCGCT
CGTGTTGCAGCCTCCTATACAACCCATCTACGTAGAGACGTATTTCATCGTGTTTTAGATTTTTCGCAGACAGAGATCAA
GCGCTTTTCAATCCCAAGTCTCTTGACTCGGACGACCAATGATATTACCCAGGTACAGATGCTCTTTACCATGGGCTTGC
AAGTGGTTACTCGTGGGCCAATTATGGCTATCTGGGCCATTGGAAAAATCCTTGGAAAATCGGAATACTGGCTCTGGGCG
GTCGTTGTGGCTGTTATTGTCAATGTCTTGATGACTACCGTTCTCATGACTCTGGCCTTTCCAAAACAATCTGTTATCCA
AAAATTGACAGATAAACTCAATAGCATCACTCGTGAAAGTTTGACTGGGATTCGAGTTGTTCGTGCATACAATGCGGAAG
ATTACCAAGATAAGAAATTTGAAGCAGCCAACGATGAGGTAACACGTCTCAATCTCTTTGTCAATCGTTTGATGGCCATT
ATGAATCCCATTATGATGGCGATTTCCAGTGGACTAAGTTTAGCTATTTACTGGATTGGTGCCTATATCATCAACGATGC
AAGTTTGGCAGAACGTCTGCCACTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGATTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCTCGTACCTTGGTTTCGGCAGGACGTATCAATCAAGTATTGGATCTGCAT
TCTTCTATTGAAAATCCTAGTCATGCACAGACAGCGGATCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGTTACTCTAAAAACTCTGAAGCAGTCGTGGAACATGTCACTTTCAAAGCAGAAGCGGGTCAAACCGTAGCCTTCATCG
GATCGACTGGATCAGGTAAGTCTACGCTTGTCAACCTCTTGCCACGTTTTTACGACGTTTCTGATGGAGAAATCCTAGTG
GATGGTGTCAATGTGCAAGATTATGACTTGGAAGATTTGCGCAATAAGGTAGGCTATATTCCACAAAAAGCTGTACTCTT
TTCTGGAGATGTCAAGGGGAACTTGGACTTTGGTAAGAGCAAAGAAACTCCTCTGAGCGAGGCTGCTATGTGGCAAGCTC
TTGAATTGGCCCAGTCTAAAGCATTTATCGAGGACAAGGAAGCAGGTCTTGCATCAGAAGTAGCCCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTCTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATCTTTGATGACTC
TTTCTCAGCCTTGGACTACAAGACAGATCGTGTCCTTCGCCAAGAGCTAGCTGAGAAAACAAAATCCATGACCAAGCTCA
TTGTAGCGCAACGGATTTCTACCATTATGGATGCTGACCTGATCTTGGTTTTGGATCAAGGTAAAGTCGTGGGACAAGGC
ACCCACAAGGAACTTCTTGCAACCAACGAAGTCTACCAAGAAATTGCCTACTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(17-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A081R397

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.391

100

0.667

Multiple sequence alignment