Detailed information NTG0291172

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: DEH83_RS03485
• Genome accession: NZ_CP029207
• Coordinates: 708491..710920 (-)
• Length: 809 a.a.
• NCBI ID: WP_255777069.1
• Uniprot ID: -
• Organism: Streptococcus constellatus strain TCV107
• Function: degradation of ComW (predicted from homology) Competence regulation

Genomic Context

Location: 703491..715920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DEH83_RS03460 (DEH83_03450)	-	703787..704605 (+)	819	WP_255777066.1	hypothetical protein	-
DEH83_RS03465 (DEH83_03455)	-	704624..705895 (+)	1272	WP_255777067.1	toxic anion resistance protein	-
DEH83_RS03470 (DEH83_03460)	hslO	706103..706975 (+)	873	WP_037591328.1	Hsp33 family molecular chaperone HslO	-
DEH83_RS03475 (DEH83_03465)	dusB	706962..707933 (+)	972	WP_058670052.1	tRNA dihydrouridine synthase DusB	-
DEH83_RS03480 (DEH83_03470)	-	708004..708444 (-)	441	WP_150203380.1	GNAT family N-acetyltransferase	-
DEH83_RS03485 (DEH83_03475)	clpC	708491..710920 (-)	2430	WP_255777069.1	ATP-dependent Clp protease ATP-binding subunit	Regulator
DEH83_RS03490 (DEH83_03480)	-	710924..711385 (-)	462	WP_119055656.1	CtsR family transcriptional regulator	-
DEH83_RS03495 (DEH83_03485)	-	711646..711996 (+)	351	WP_003071086.1	hypothetical protein	-

Sequence

Protein

• Length: 809 a.a.
• Molecular weight: 90012.37 Da
• Isoelectric Point: 6.4434

>NTDB_id=291172 DEH83_RS03485 WP_255777069.1 708491..710920(-) (clpC) [Streptococcus constellatus strain TCV107]
MKHSKALTESIESAQLLASHFETDYLESWQLLIAMANNPYSVAGSVLNDYPLEIDDFEKAAFHITGKVYQQEGAFTIWPF
SYRMKVLFLTAEQIAEAVHAKNLGTEHVLLAMLFDRGSLAARILEFIGFSYEDKEGALRMTDLRKNLEHKASWNKEDLKA
IRHLNKNAAATRQTMANMMGMPPATSGGLEDYTRDLTEMAHMGLLEPVIGRDKEISRMLQILSRKTKNNPVLVGDAGVGK
TALALGLAQRVAAGQVPNELAKMRVLELDLMNVVAGTRFRGDFEERMNNIINDIEADGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKYIEKDAALSRRFAKVAIEEPTVADSIAILQGLKKTYEDHHKVVITDSAIET
AVKYAHRYLTSKHLPDSAIDLLDEAAATVQNKGPQNHVKVELSVADEALMAGNWNKVSTLLEKESQPIVYKLRVKDEDVL
ATLSSLSGIPVQKLTQTDAKKYLNLEKELHKRVIGQNEAISAISRAIRRNQSGIRTSKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDETALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNRPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKVDFSNTIIIMTSNLGATSLRDDKTVGFGARDVRFDHENMEKRMMEELKKAYRPEFINRIDEKVVFHSLTSE
DMQEVVKIMVQPLISSLAEKGIKLKFQPSALKLLAQEGYDPEMGARPLRRILQTRVEDHLSELLLAGELKTGQSLKVGVK
AGKLKFEVL

Nucleotide

• Length: 2430 bp

>NTDB_id=291172 DEH83_RS03485 WP_255777069.1 708491..710920(-) (clpC) [Streptococcus constellatus strain TCV107]
ATGAAACATTCAAAAGCTTTGACAGAAAGTATTGAATCAGCACAGCTATTAGCAAGTCATTTTGAAACGGATTATTTAGA
GTCTTGGCAGCTGTTGATTGCTATGGCAAATAATCCTTATAGTGTTGCTGGTTCAGTTTTAAATGATTATCCACTTGAAA
TTGATGATTTTGAAAAGGCGGCTTTTCATATCACGGGGAAAGTCTATCAACAAGAGGGAGCCTTTACTATTTGGCCGTTT
TCTTATCGCATGAAAGTGTTATTTTTGACTGCTGAACAAATTGCAGAGGCGGTTCATGCCAAGAACCTTGGGACAGAGCA
TGTGTTGCTAGCTATGTTATTTGACCGAGGAAGTTTGGCAGCGCGTATTCTTGAATTTATTGGTTTTAGTTACGAAGACA
AAGAAGGTGCTCTACGCATGACAGATCTTCGGAAAAATTTAGAGCATAAGGCAAGCTGGAATAAAGAGGATTTAAAGGCG
ATTCGTCACCTGAATAAAAATGCTGCAGCAACAAGACAAACGATGGCTAATATGATGGGAATGCCTCCTGCAACCAGTGG
CGGACTAGAAGATTATACTCGTGATCTAACTGAAATGGCTCATATGGGCCTTTTAGAACCGGTCATTGGGCGGGATAAAG
AGATTTCTCGCATGCTTCAGATTTTAAGTCGCAAGACGAAAAATAATCCAGTTTTGGTAGGAGATGCAGGAGTTGGGAAG
ACAGCATTAGCCCTTGGTTTGGCGCAACGTGTGGCAGCTGGTCAAGTTCCAAATGAGCTTGCAAAGATGAGAGTTTTAGA
GCTAGATTTAATGAATGTGGTGGCTGGAACTCGTTTTCGTGGTGATTTTGAGGAACGGATGAACAATATTATCAATGATA
TTGAAGCAGATGGACATGTCATTCTTTTCATTGATGAGCTTCATACTATTATGGGGTCGGGTAGCGGGATTGACTCGACA
TTAGATGCAGCAAATATTCTCAAGCCGGCTTTGGCCAGAGGGACACTCAGAACGGTCGGCGCAACGACACAAGAAGAGTA
CCAGAAATATATTGAAAAGGACGCAGCTCTTTCACGGCGCTTTGCTAAGGTTGCTATTGAAGAGCCAACAGTAGCTGATA
GTATTGCGATTTTACAAGGGCTAAAGAAAACTTATGAAGATCACCACAAGGTCGTGATTACGGATTCGGCCATTGAGACG
GCTGTTAAGTATGCTCATCGTTATCTAACAAGCAAACATCTACCGGATTCGGCCATTGATTTGCTAGATGAAGCTGCTGC
AACAGTACAAAATAAAGGTCCGCAAAATCACGTAAAAGTCGAATTGAGTGTAGCAGACGAGGCTTTAATGGCAGGCAATT
GGAACAAAGTTAGTACATTGTTGGAGAAAGAGAGTCAGCCGATTGTCTATAAATTAAGAGTGAAAGACGAGGATGTTTTG
GCAACGCTCAGCAGTTTATCAGGTATTCCCGTGCAAAAGTTGACGCAAACAGATGCGAAGAAATACCTCAATTTAGAAAA
GGAACTGCACAAGCGGGTCATTGGGCAAAATGAAGCAATTTCTGCTATTAGTCGAGCGATTCGGCGCAATCAATCCGGTA
TCCGCACTAGCAAGCGTCCAATTGGCTCCTTTATGTTCTTAGGGCCAACCGGGGTCGGAAAAACTGAGCTAGCTAAGGCT
TTGGCAGAAGTTCTCTTTGATGACGAAACAGCACTGATTCGTTTTGATATGAGTGAATACATGGAAAAATTTGCTGCCAG
TCGCCTTAATGGAGCACCTCCAGGTTATGTTGGTTATGAAGAAGGGGGCGAATTAACTGAAAAAGTTCGCAATCGTCCGT
ACTCTGTACTCCTCTTTGATGAGGTAGAAAAAGCACATCCTGATATTTTCAATGTGCTTCTCCAAGTCTTAGATGACGGG
GTGCTGACAGACAGCAAGGGGCGTAAGGTGGATTTTTCCAATACCATTATCATTATGACCAGCAATCTTGGTGCGACAAG
TTTACGGGACGACAAGACGGTTGGGTTCGGAGCAAGAGATGTTCGTTTTGATCATGAAAATATGGAAAAACGAATGATGG
AAGAGCTAAAGAAAGCTTATCGTCCAGAATTTATTAACCGAATTGATGAAAAGGTTGTTTTTCACAGTTTGACTAGCGAA
GACATGCAGGAAGTGGTGAAAATTATGGTGCAACCGCTCATTTCTAGTCTTGCAGAAAAAGGAATTAAACTCAAATTCCA
GCCGAGTGCTTTGAAGCTTCTAGCTCAAGAGGGCTATGATCCTGAAATGGGAGCTCGTCCATTGCGTCGAATTCTACAAA
CTCGGGTGGAAGACCATTTATCAGAATTACTTTTAGCAGGTGAGCTAAAAACGGGACAAAGCTTGAAAGTCGGTGTCAAG
GCTGGAAAATTGAAGTTTGAGGTGCTCTGA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (539-710)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (717-797)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (14-60)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (91-134)

• ATPase family associated with various cellular activities (AAA) (AAA) (231-347)

• AAA lid domain (AAA_lid_9) (371-441)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Streptococcus pneumoniae TIGR4	77.559	100	0.778
clpC	Streptococcus pneumoniae Rx1	77.559	100	0.778
clpC	Streptococcus pneumoniae D39	77.559	100	0.778
clpC	Streptococcus mutans UA159	66.135	100	0.666
clpC	Streptococcus thermophilus LMG 18311	65.233	100	0.656
clpC	Streptococcus thermophilus LMD-9	65.111	100	0.655
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	49.759	100	0.511
clpC	Bacillus subtilis subsp. subtilis str. 168	45.387	99.135	0.45