Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   DEH83_RS02665 Genome accession   NZ_CP029207
Coordinates   546705..547436 (-) Length   243 a.a.
NCBI ID   WP_255776990.1    Uniprot ID   -
Organism   Streptococcus constellatus strain TCV107     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 541705..552436
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DEH83_RS02640 (DEH83_02610) rimP 542385..542855 (-) 471 WP_369522560.1 ribosome maturation factor RimP -
  DEH83_RS02645 (DEH83_02615) - 543085..543777 (-) 693 WP_126441167.1 VIT family protein -
  DEH83_RS02650 (DEH83_02620) trmB 544183..544818 (-) 636 WP_003078354.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  DEH83_RS02655 (DEH83_02625) ccrZ 544815..545612 (-) 798 WP_006269344.1 cell cycle regulator CcrZ -
  DEH83_RS02660 (DEH83_02630) - 545663..546708 (-) 1046 Protein_526 ABC transporter permease -
  DEH83_RS02665 (DEH83_02635) pptA 546705..547436 (-) 732 WP_255776990.1 ABC transporter ATP-binding protein Regulator
  DEH83_RS02670 (DEH83_02640) - 547506..547916 (+) 411 WP_003070368.1 HIT family protein -
  DEH83_RS02675 (DEH83_02645) - 547926..548213 (+) 288 WP_119055745.1 hypothetical protein -
  DEH83_RS02680 (DEH83_02650) - 548254..549360 (-) 1107 WP_070484146.1 LCP family protein -
  DEH83_RS02685 (DEH83_02655) - 549368..549889 (-) 522 WP_039676501.1 GNAT family N-acetyltransferase -
  DEH83_RS02690 (DEH83_02660) tsaE 549882..550322 (-) 441 WP_003070375.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  DEH83_RS02695 (DEH83_02665) - 550660..552099 (-) 1440 WP_255776991.1 NCS2 family permease -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 27050.49 Da        Isoelectric Point: 4.5320

>NTDB_id=291169 DEH83_RS02665 WP_255776990.1 546705..547436(-) (pptA) [Streptococcus constellatus strain TCV107]
MLEIKGLTGGYINIPVLKDISFTVENGELVGLIGLNGAGKSTTINEIIGLLTPYKGEILIDGAKLQDNPMAYRKKIGFIP
ETPSLYEELTLREHIETVAMAYDVDQEVAFARVEQLLTKFRLQEKLDWFPVHFSKGMKQKVMIICAFVVDPSLFIVDEPF
LGLDPVAIADLIELLKDEKTKGKSILMSTHVLDSAERMCDSFVILHKGEIRAKGNLSELQSEFSMPEASLNEIYLALTEE
ASL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=291169 DEH83_RS02665 WP_255776990.1 546705..547436(-) (pptA) [Streptococcus constellatus strain TCV107]
ATGTTAGAAATAAAAGGGCTTACAGGAGGTTATATAAATATCCCTGTTTTAAAAGATATCAGTTTCACAGTAGAAAATGG
TGAGCTGGTGGGGTTAATTGGTTTAAATGGTGCTGGAAAGTCTACAACAATCAATGAAATTATTGGACTTTTAACTCCTT
ATAAAGGGGAAATTTTAATTGACGGCGCTAAACTGCAAGACAATCCCATGGCTTATCGTAAGAAAATTGGATTTATTCCA
GAGACCCCTAGTTTATATGAGGAATTGACTTTAAGAGAGCACATTGAAACAGTTGCTATGGCTTATGATGTCGATCAAGA
GGTAGCTTTTGCGCGCGTGGAGCAATTATTGACCAAGTTTCGCTTGCAAGAAAAATTGGATTGGTTCCCCGTTCACTTTT
CAAAGGGAATGAAGCAAAAAGTCATGATTATTTGCGCCTTTGTAGTTGATCCGAGTCTCTTTATCGTGGATGAGCCATTT
TTGGGACTCGATCCAGTAGCGATTGCTGATTTGATAGAGCTTTTGAAAGATGAAAAGACAAAAGGCAAGTCTATCCTGAT
GAGTACGCATGTGTTGGACTCAGCAGAAAGAATGTGTGATTCATTCGTGATTTTGCACAAGGGGGAAATCCGAGCGAAAG
GTAACTTATCAGAGTTGCAATCAGAATTTTCTATGCCAGAAGCTAGCCTGAATGAGATCTATCTGGCATTGACAGAAGAG
GCAAGCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

71.13

98.354

0.7
  pptA Streptococcus salivarius strain HSISS4

70.711

98.354

0.695

Multiple sequence alignment