Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SGO_RS08585 Genome accession   NC_009785
Coordinates   1818108..1819874 (-) Length   588 a.a.
NCBI ID   WP_012130788.1    Uniprot ID   A8AZ11
Organism   Streptococcus gordonii str. Challis substr. CH1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1813108..1824874
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGO_RS08570 (SGO_1748) - 1813200..1814813 (-) 1614 WP_012130785.1 CTP synthase -
  SGO_RS08575 (SGO_1749) manA 1815253..1816197 (-) 945 WP_012130786.1 mannose-6-phosphate isomerase, class I -
  SGO_RS08580 (SGO_1750) rcrQ 1816361..1818118 (-) 1758 WP_012130787.1 ABC transporter ATP-binding protein Regulator
  SGO_RS08585 (SGO_1751) rcrP 1818108..1819874 (-) 1767 WP_012130788.1 ABC transporter ATP-binding protein Regulator
  SGO_RS08590 (SGO_1752) - 1819867..1820325 (-) 459 WP_012130789.1 MarR family winged helix-turn-helix transcriptional regulator -
  SGO_RS08595 (SGO_1753) - 1820597..1821166 (-) 570 WP_012130790.1 hypothetical protein -
  SGO_RS08600 (SGO_1754) - 1821176..1821586 (-) 411 WP_012130791.1 peptide deformylase -
  SGO_RS08605 (SGO_1755) scrK 1821635..1822534 (-) 900 WP_012130792.1 fructokinase ScrK -
  SGO_RS08610 (SGO_1756) - 1822775..1823299 (-) 525 WP_012130793.1 hypothetical protein -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 64886.17 Da        Isoelectric Point: 5.4497

>NTDB_id=29095 SGO_RS08585 WP_012130788.1 1818108..1819874(-) (rcrP) [Streptococcus gordonii str. Challis substr. CH1]
MFKLFKRLTSKEIGLILMTVVFICLTVYLELEVPTYMSEITTLLQTPGTTTGDLWVPGLKMLGLSFASLFSLVIAGFVSS
RMASSYTTRLREDIFNRVLDYSNSEIKKFSIPSLLTRTTNDITQIQVFIAMGLQVVIRGSIMAIWAMTKVVGKSDAWLIA
VLVAVAAIILMTIVLVTLAFPKQSIVQTLTDKLNSVTRESLTGIRVVRAYNAEDYQDAKFGAANDEVTSLNIFINRFMSL
FNPIMSGISSGLTLAIYWIGAYLIHSAASADKLGLFSDMVVFMSYGMQVVIGFLLMGALFIVLPRTLVSAGRINKVLALD
SSIKEKDQAQTEGQSKGQVTFEDVSFRYAKNSEAVIEHVSFTAKAGETVAFIGSTGSGKSTLVNLIPRFYDVTEGRILVD
GVDVRDYELKALRNKVGYIPQKAVLFSGTIASNLDFGESMETPLDEEKMWEALELAQAKSFVEEKEAGLESEVSQGGTNY
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAEQTQHMTKLIVAQRISTIMDADQILVLDNGKVVGQGT
HKELLATNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=29095 SGO_RS08585 WP_012130788.1 1818108..1819874(-) (rcrP) [Streptococcus gordonii str. Challis substr. CH1]
ATGTTTAAATTATTTAAACGCTTGACGTCAAAAGAAATCGGACTGATTTTGATGACAGTTGTTTTTATCTGTCTGACCGT
TTATTTAGAGTTGGAAGTGCCAACTTATATGTCGGAAATTACAACCTTACTACAGACACCGGGGACAACGACAGGAGATC
TATGGGTGCCAGGTTTGAAAATGCTAGGCCTATCCTTTGCCAGCTTATTCTCCTTGGTAATAGCTGGTTTTGTGTCCTCT
CGGATGGCTTCTAGCTATACTACCCGCTTGCGCGAGGATATTTTTAATCGTGTTTTGGATTATTCTAATTCAGAGATTAA
AAAATTCTCTATCCCAAGTCTTCTGACCAGAACAACCAACGATATTACCCAAATTCAGGTGTTTATCGCTATGGGATTAC
AAGTTGTTATCCGAGGAAGCATCATGGCGATTTGGGCTATGACGAAGGTTGTTGGCAAATCAGATGCTTGGTTGATCGCT
GTTTTAGTCGCGGTTGCAGCCATTATATTAATGACGATTGTCTTAGTGACTTTGGCTTTTCCAAAGCAATCTATTGTACA
AACCTTGACTGATAAGTTAAATAGTGTGACACGTGAGAGTTTGACAGGGATTCGGGTTGTTCGGGCCTATAATGCAGAAG
ATTACCAGGATGCAAAATTTGGTGCAGCAAACGACGAGGTAACTAGCCTTAATATTTTTATTAACCGCTTCATGTCTTTG
TTCAATCCGATTATGAGCGGAATTTCAAGTGGTTTAACGCTGGCTATTTATTGGATTGGAGCTTATTTGATTCATAGCGC
AGCATCTGCTGATAAGCTTGGTCTATTCAGTGATATGGTTGTTTTCATGTCTTATGGTATGCAGGTTGTAATTGGCTTCT
TGCTGATGGGGGCTTTATTTATTGTTTTACCACGTACCCTTGTTTCGGCTGGACGGATTAACAAAGTGTTAGCACTGGAT
AGCAGTATCAAAGAAAAAGATCAAGCACAGACTGAGGGCCAAAGTAAAGGACAAGTAACTTTTGAAGATGTTTCTTTCCG
TTATGCAAAAAATTCTGAAGCAGTAATTGAGCATGTTAGTTTCACTGCTAAAGCTGGTGAAACAGTTGCCTTTATTGGAT
CTACTGGTTCAGGTAAATCAACCCTTGTCAATTTGATACCTCGTTTCTATGATGTGACAGAAGGTAGGATTCTAGTCGAT
GGTGTAGATGTCCGTGACTACGAGCTTAAAGCTCTACGTAATAAGGTAGGGTATATTCCGCAGAAAGCTGTACTTTTCTC
AGGGACAATTGCTTCAAATTTGGACTTTGGAGAAAGCATGGAAACTCCACTAGATGAAGAGAAAATGTGGGAAGCCCTTG
AACTAGCACAAGCCAAATCATTTGTAGAAGAAAAAGAGGCAGGGCTTGAGTCTGAAGTGTCTCAAGGAGGCACCAACTAT
TCTGGTGGTCAACGCCAACGTCTGGCTATTGCGCGTGCATTGGCCCGTAAGCCGGAAATTTTGATATTTGATGATTCTTT
CTCTGCTTTGGACTATAAGACAGATCGTATATTACGAAAAGAATTGGCAGAACAGACCCAACATATGACAAAACTGATTG
TCGCCCAACGAATTTCCACTATTATGGATGCCGATCAAATCCTAGTTCTAGACAATGGTAAAGTCGTTGGACAAGGTACC
CATAAAGAGTTGTTGGCTACGAATGAAGTGTACCAAGAAATTGCTTATTCTCAATTATCAAAGGAGGAACTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(54-285)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AZ11

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

69.167

100

0.706

Multiple sequence alignment