Detailed information NTG0290938

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: A1D74_RS21665
• Genome accession: NZ_CP034794
• Coordinates: 4183283..4184266 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain 06-3462
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4178283..4189266

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A1D74_RS21640	bcsF	4178444..4178635 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
A1D74_RS21645	bcsG	4178632..4180311 (+)	1680	WP_000191596.1	cellulose biosynthesis protein BcsG	-
A1D74_RS21650	ldrD	4180398..4180505 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
A1D74_RS21655	yhjV	4180981..4182252 (+)	1272	WP_001301684.1	aromatic amino acid transport family protein	-
A1D74_RS21660	dppF	4182282..4183286 (-)	1005	WP_000107027.1	dipeptide ABC transporter ATP-binding subunit DppF	-
A1D74_RS21665	amiE	4183283..4184266 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
A1D74_RS21670	dppC	4184277..4185179 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
A1D74_RS21675	dppB	4185189..4186208 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
A1D74_RS21685	dppA	4186359..4187966 (-)	1608	WP_001222888.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=290938 A1D74_RS21665 WP_001196486.1 4183283..4184266(-) (amiE) [Escherichia coli strain 06-3462]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=290938 A1D74_RS21665 WP_001196486.1 4183283..4184266(-) (amiE) [Escherichia coli strain 06-3462]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATTAG
CTACAGCGTAAAACAGGGCGAAGTAGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGTAATAAGAGCACTCGTCGTCAGCGGGCGATTGACT
TGTTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATTGCGATGGCCATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCCGGTCAGGTGGTGGAAACGGGCGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTTGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCTTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404