Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | DD562_RS08730 | Genome accession | NZ_CP029172 |
| Coordinates | 1725205..1725504 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain PTDrAP2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1720205..1730504
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DD562_RS08705 (DD562_08705) | gcvPA | 1721417..1722763 (-) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| DD562_RS08710 (DD562_08710) | gcvT | 1722783..1723874 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DD562_RS08715 (DD562_08715) | - | 1724033..1724557 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| DD562_RS08720 (DD562_08720) | - | 1724547..1724693 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| DD562_RS08725 (DD562_08725) | comGF | 1724790..1725287 (-) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DD562_RS08730 (DD562_08730) | comGE | 1725205..1725504 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| DD562_RS08735 (DD562_08735) | comGD | 1725491..1725937 (-) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DD562_RS08740 (DD562_08740) | comGC | 1725915..1726226 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DD562_RS08745 (DD562_08745) | comGB | 1726240..1727310 (-) | 1071 | WP_000776425.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DD562_RS08750 (DD562_08750) | comGA | 1727282..1728256 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DD562_RS08755 (DD562_08755) | - | 1728308..1728931 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| DD562_RS08760 (DD562_08760) | - | 1728928..1729257 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| DD562_RS08765 (DD562_08765) | - | 1729257..1730243 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| DD562_RS08770 (DD562_08770) | - | 1730240..1730443 (-) | 204 | WP_000087559.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=290920 DD562_RS08730 WP_000844413.1 1725205..1725504(-) (comGE) [Staphylococcus aureus strain PTDrAP2]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=290920 DD562_RS08730 WP_000844413.1 1725205..1725504(-) (comGE) [Staphylococcus aureus strain PTDrAP2]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |