Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | DBX24_RS04800 | Genome accession | NZ_CP029149 |
| Coordinates | 1038306..1039421 (+) | Length | 371 a.a. |
| NCBI ID | WP_160224123.1 | Uniprot ID | A0A6P1QWZ6 |
| Organism | Bergeyella cardium strain HPQL | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1033306..1044421
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBX24_RS04760 (DBX24_04760) | - | 1033440..1034348 (+) | 909 | WP_160224117.1 | GYDIA family GHMP kinase | - |
| DBX24_RS04765 (DBX24_04765) | - | 1034515..1034841 (+) | 327 | WP_160224118.1 | hypothetical protein | - |
| DBX24_RS04770 (DBX24_04770) | - | 1034853..1035053 (+) | 201 | WP_160224119.1 | hypothetical protein | - |
| DBX24_RS04775 (DBX24_04775) | - | 1035350..1035691 (+) | 342 | WP_160224120.1 | hypothetical protein | - |
| DBX24_RS04780 (DBX24_04780) | - | 1035801..1036169 (+) | 369 | WP_120489817.1 | hypothetical protein | - |
| DBX24_RS04785 (DBX24_04785) | - | 1036179..1037162 (+) | 984 | WP_160224121.1 | aminoglycoside phosphotransferase family protein | - |
| DBX24_RS04790 (DBX24_04790) | - | 1037165..1037569 (+) | 405 | WP_120489815.1 | RNase adapter RapZ | - |
| DBX24_RS04795 (DBX24_04795) | - | 1037581..1038294 (+) | 714 | WP_160224122.1 | sugar phosphate nucleotidyltransferase | - |
| DBX24_RS04800 (DBX24_04800) | dprA | 1038306..1039421 (+) | 1116 | WP_160224123.1 | DNA-processing protein DprA | Machinery gene |
| DBX24_RS04805 (DBX24_04805) | gdhA | 1039611..1040970 (+) | 1360 | Protein_940 | NADP-specific glutamate dehydrogenase | - |
| DBX24_RS04810 (DBX24_04810) | - | 1041139..1043280 (-) | 2142 | WP_160224124.1 | S46 family peptidase | - |
| DBX24_RS04815 (DBX24_04815) | - | 1043435..1043569 (+) | 135 | WP_160224125.1 | DUF4469 domain-containing protein | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 41219.03 Da Isoelectric Point: 7.0075
>NTDB_id=290739 DBX24_RS04800 WP_160224123.1 1038306..1039421(+) (dprA) [Bergeyella cardium strain HPQL]
MFSEEHLYSIALRSCKNIGDANFRKLINAFGSASSVWNADKRQLTKVYGISQGMISEIGSSEHLDFAKRELDFCEKNNIQ
ILLRHSGELPFFLDDCIDAPAILYKKGAINENLIPVSIVGTRNMTAYGKDFIRYFLSITKEMNLLTVSGLAYGVDSEVHQ
QSVGNDVPTVAVLAHGLHTLYPSKNKRLSEQILERCGALITEFNSSHKPDREHFIQRNRIIAGISRNLIVVETAFGGGSI
STATFANGYNREVYALPGRITDKYSQGCNHLIYQNKAGTISSVKTLIDNLGLKVPSEAESTGELFPQKSVKVQLSGMQKT
LYDIIESHPKINLDDLAEKSDLQTYEILPVLLELEILGYIKSFSGRQFAVS
MFSEEHLYSIALRSCKNIGDANFRKLINAFGSASSVWNADKRQLTKVYGISQGMISEIGSSEHLDFAKRELDFCEKNNIQ
ILLRHSGELPFFLDDCIDAPAILYKKGAINENLIPVSIVGTRNMTAYGKDFIRYFLSITKEMNLLTVSGLAYGVDSEVHQ
QSVGNDVPTVAVLAHGLHTLYPSKNKRLSEQILERCGALITEFNSSHKPDREHFIQRNRIIAGISRNLIVVETAFGGGSI
STATFANGYNREVYALPGRITDKYSQGCNHLIYQNKAGTISSVKTLIDNLGLKVPSEAESTGELFPQKSVKVQLSGMQKT
LYDIIESHPKINLDDLAEKSDLQTYEILPVLLELEILGYIKSFSGRQFAVS
Nucleotide
Download Length: 1116 bp
>NTDB_id=290739 DBX24_RS04800 WP_160224123.1 1038306..1039421(+) (dprA) [Bergeyella cardium strain HPQL]
ATGTTTTCGGAAGAGCATCTTTATTCCATCGCCCTACGCTCCTGTAAAAATATAGGAGATGCTAATTTCCGAAAGCTCAT
AAATGCTTTTGGAAGTGCTTCCTCCGTGTGGAATGCAGATAAAAGACAGCTTACAAAAGTCTATGGTATTTCTCAGGGAA
TGATTTCCGAGATAGGCTCATCTGAGCATTTAGACTTTGCAAAGAGGGAATTAGACTTCTGTGAGAAGAATAATATTCAG
ATTCTACTTCGGCACAGTGGTGAGCTCCCTTTTTTCTTAGATGATTGTATAGATGCTCCTGCGATCCTCTATAAAAAAGG
AGCTATCAATGAGAATCTTATACCTGTGAGCATCGTTGGTACCCGCAATATGACGGCTTATGGTAAGGACTTTATAAGAT
ACTTCCTGTCTATCACCAAAGAGATGAACCTCCTTACAGTGAGCGGACTTGCCTATGGTGTAGATTCAGAAGTGCATCAG
CAGTCTGTGGGGAATGATGTACCTACTGTTGCAGTGCTTGCACACGGTCTCCACACTCTTTACCCATCTAAGAATAAGCG
CTTGTCTGAGCAGATATTAGAGCGATGCGGTGCTTTAATTACAGAATTTAATTCTTCCCATAAACCCGACAGGGAGCATT
TCATCCAGAGGAATAGAATTATAGCGGGTATTTCCAGAAACTTAATCGTAGTAGAAACTGCTTTTGGTGGGGGCTCTATC
AGTACGGCGACTTTTGCCAATGGCTATAACAGGGAAGTCTATGCTTTGCCAGGTCGTATCACAGATAAGTACAGTCAAGG
CTGTAATCATCTTATTTATCAGAATAAGGCGGGGACTATTTCCAGTGTTAAAACTCTTATTGATAATCTCGGTTTGAAAG
TCCCATCAGAAGCCGAAAGCACAGGTGAACTCTTCCCTCAGAAATCGGTTAAGGTACAACTCTCAGGAATGCAGAAAACA
CTCTATGATATTATAGAGAGCCACCCTAAAATCAATTTGGATGACCTTGCTGAGAAATCCGATTTACAGACCTATGAAAT
CCTCCCTGTTTTACTTGAACTCGAAATCTTGGGGTATATTAAGTCTTTTTCGGGAAGGCAATTTGCGGTTTCTTAG
ATGTTTTCGGAAGAGCATCTTTATTCCATCGCCCTACGCTCCTGTAAAAATATAGGAGATGCTAATTTCCGAAAGCTCAT
AAATGCTTTTGGAAGTGCTTCCTCCGTGTGGAATGCAGATAAAAGACAGCTTACAAAAGTCTATGGTATTTCTCAGGGAA
TGATTTCCGAGATAGGCTCATCTGAGCATTTAGACTTTGCAAAGAGGGAATTAGACTTCTGTGAGAAGAATAATATTCAG
ATTCTACTTCGGCACAGTGGTGAGCTCCCTTTTTTCTTAGATGATTGTATAGATGCTCCTGCGATCCTCTATAAAAAAGG
AGCTATCAATGAGAATCTTATACCTGTGAGCATCGTTGGTACCCGCAATATGACGGCTTATGGTAAGGACTTTATAAGAT
ACTTCCTGTCTATCACCAAAGAGATGAACCTCCTTACAGTGAGCGGACTTGCCTATGGTGTAGATTCAGAAGTGCATCAG
CAGTCTGTGGGGAATGATGTACCTACTGTTGCAGTGCTTGCACACGGTCTCCACACTCTTTACCCATCTAAGAATAAGCG
CTTGTCTGAGCAGATATTAGAGCGATGCGGTGCTTTAATTACAGAATTTAATTCTTCCCATAAACCCGACAGGGAGCATT
TCATCCAGAGGAATAGAATTATAGCGGGTATTTCCAGAAACTTAATCGTAGTAGAAACTGCTTTTGGTGGGGGCTCTATC
AGTACGGCGACTTTTGCCAATGGCTATAACAGGGAAGTCTATGCTTTGCCAGGTCGTATCACAGATAAGTACAGTCAAGG
CTGTAATCATCTTATTTATCAGAATAAGGCGGGGACTATTTCCAGTGTTAAAACTCTTATTGATAATCTCGGTTTGAAAG
TCCCATCAGAAGCCGAAAGCACAGGTGAACTCTTCCCTCAGAAATCGGTTAAGGTACAACTCTCAGGAATGCAGAAAACA
CTCTATGATATTATAGAGAGCCACCCTAAAATCAATTTGGATGACCTTGCTGAGAAATCCGATTTACAGACCTATGAAAT
CCTCCCTGTTTTACTTGAACTCGAAATCTTGGGGTATATTAAGTCTTTTTCGGGAAGGCAATTTGCGGTTTCTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Riemerella anatipestifer ATCC 11845 = DSM 15868 |
52.989 |
99.191 |
0.526 |