Detailed information NTG0029062

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: ECS88_RS18055
• Genome accession: NC_011742
• Coordinates: 3283598..3284803 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161829.1
• Uniprot ID: A0A0H2Z2G4
• Organism: Escherichia coli S88
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3278598..3289803

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ECS88_RS18040 (ECS88_3323)	-	3279113..3280789 (+)	1677	WP_001331697.1	polysaccharide biosynthesis/export family protein	-
ECS88_RS18045 (ECS88_3324)	kdsB	3280799..3281539 (+)	741	WP_000030755.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ECS88_RS18050 (ECS88_3325)	-	3281536..3283563 (+)	2028	WP_000579525.1	capsular polysaccharide biosynthesis protein	-
ECS88_RS18055 (ECS88_3326)	kpsS	3283598..3284803 (+)	1206	WP_001161829.1	capsular biosynthesis protein	Regulator
ECS88_RS18060	-	3284953..3286182 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
ECS88_RS18065 (ECS88_3327)	-	3286172..3287320 (-)	1149	WP_000197083.1	DUF6716 putative glycosyltransferase	-
ECS88_RS18070 (ECS88_3328)	neuC	3287313..3288488 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
ECS88_RS18075 (ECS88_3329)	-	3288485..3289741 (-)	1257	WP_001259305.1	GDSL-type esterase/lipase family protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47976.30 Da
• Isoelectric Point: 10.0024

>NTDB_id=29062 ECS88_RS18055 WP_001161829.1 3283598..3284803(+) (kpsS) [Escherichia coli S88]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEDGVNAYSSLPRDPDFYRKLPDMPTPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLSERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=29062 ECS88_RS18055 WP_001161829.1 3283598..3284803(+) (kpsS) [Escherichia coli S88]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGCCGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GTCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTTCCCGGATGGTTACGGGATCTCCATCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGCTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAGGAAGGATATTTACGCCCGCAATTTATTACCGTTGAAGAAGACGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTACGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGCTGGCATTACCGCCATGAGTTCCCTCGCTACCGCCACCATAA
ATCGTTTTCCCCCTGGTATGAAGCACGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTACCGAGGTTAATGAACGAGTTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTATATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCGCCGAAAGA
AAGTTATTTGGTGATCAAACATCATCCGATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGTTAAGTAAGG
AATATGGCTTAAGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

3D structure

• AlphaFold DB: A0A0H2Z2G4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	40.103	97.007	0.389