Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SGO_RS02660 Genome accession   NC_009785
Coordinates   582624..583355 (+) Length   243 a.a.
NCBI ID   WP_008808542.1    Uniprot ID   A8AVP4
Organism   Streptococcus gordonii str. Challis substr. CH1     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 577624..588355
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGO_RS02630 (SGO_0532) - 578013..579437 (+) 1425 WP_012000036.1 NCS2 family permease -
  SGO_RS02635 (SGO_0533) tsaE 579520..579966 (+) 447 WP_041789558.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SGO_RS02640 (SGO_0534) - 579966..580490 (+) 525 WP_041789560.1 GNAT family N-acetyltransferase -
  SGO_RS02645 (SGO_0535) brpA 580497..581708 (+) 1212 WP_012000039.1 biofilm formation/cell division transcriptional regulator BrpA -
  SGO_RS02650 (SGO_0536) - 581756..582058 (-) 303 WP_012000040.1 hypothetical protein -
  SGO_RS02655 (SGO_0537) - 582069..582485 (-) 417 WP_041789561.1 HIT family protein -
  SGO_RS02660 (SGO_0538) pptA 582624..583355 (+) 732 WP_008808542.1 ABC transporter ATP-binding protein Regulator
  SGO_RS02665 (SGO_0539) pptB 583352..584407 (+) 1056 WP_012000042.1 ABC transporter permease Regulator
  SGO_RS02670 (SGO_0540) ccrZ 584448..585242 (+) 795 WP_008808544.1 cell cycle regulator CcrZ -
  SGO_RS02675 (SGO_0541) trmB 585239..585877 (+) 639 WP_012000043.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SGO_RS02680 (SGO_0542) rimP 585986..586474 (+) 489 WP_012000044.1 ribosome maturation factor RimP -
  SGO_RS02685 (SGO_0543) nusA 586520..587761 (+) 1242 WP_012000045.1 transcription termination factor NusA -
  SGO_RS02690 (SGO_0544) rnpM 587772..588068 (+) 297 WP_008808548.1 RNase P modulator RnpM -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26859.31 Da        Isoelectric Point: 4.5712

>NTDB_id=29058 SGO_RS02660 WP_008808542.1 582624..583355(+) (pptA) [Streptococcus gordonii str. Challis substr. CH1]
MLEIKGLTGGYVNIPVLKDVSFEVGDGQLVGLIGLNGAGKSTTINEIIGLLTPYQGEILIDGLSLKSDRTAYRKKIGFIP
ETPSLYEELTLKEHIETVAMAYDIDSQTAIDRVEKLLQIFRLKDKLDWFPVNFSKGMKQKVMIICAFVIDPSLFIVDEPF
LGLDPLAISDLIELLAEEKAKGKSILMSTHVLDSAEKMCDSFVILHKGQVRAKGNLAQLREEFSLPEASLNEIYLALTEE
AAL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=29058 SGO_RS02660 WP_008808542.1 582624..583355(+) (pptA) [Streptococcus gordonii str. Challis substr. CH1]
ATGTTAGAAATAAAAGGGCTTACAGGTGGCTATGTCAATATTCCTGTTTTGAAAGATGTCAGTTTTGAAGTTGGAGACGG
TCAGCTTGTTGGACTGATTGGTCTAAACGGGGCTGGAAAGTCAACAACCATCAATGAAATAATCGGTCTCTTGACGCCTT
ATCAAGGGGAAATTTTGATAGATGGTTTGAGCCTGAAGTCAGACAGGACAGCCTATCGCAAAAAGATTGGTTTTATACCT
GAAACACCGAGTCTCTATGAAGAATTAACCTTGAAGGAACATATTGAGACGGTTGCTATGGCTTATGATATTGACTCGCA
AACAGCAATAGATCGAGTGGAAAAATTGCTTCAGATTTTTCGTCTTAAAGACAAGTTGGATTGGTTCCCGGTCAATTTCT
CAAAGGGAATGAAGCAGAAGGTTATGATCATCTGTGCCTTTGTGATTGACCCTAGTTTGTTTATTGTGGATGAACCCTTT
TTAGGATTGGATCCTCTGGCCATCTCTGATTTGATTGAGCTCTTGGCAGAAGAAAAGGCTAAAGGGAAGTCTATCCTGAT
GAGTACTCATGTGCTTGATTCGGCAGAGAAAATGTGCGATTCTTTTGTTATCTTGCACAAGGGTCAGGTACGGGCTAAAG
GAAATTTAGCACAGTTGCGAGAAGAATTTTCATTGCCAGAAGCAAGTCTCAATGAAATCTACCTAGCTTTGACAGAAGAG
GCTGCCCTATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AVP4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

74.059

98.354

0.728
  pptA Streptococcus thermophilus LMD-9

73.222

98.354

0.72

Multiple sequence alignment