Detailed information
Bioinformatically predicted
Overview
| Name | luxP | Type | Regulator |
| Locus tag | VIBHAR_RS20130 | Genome accession | NC_009784 |
| Coordinates | 579654..580751 (+) | Length | 365 a.a. |
| NCBI ID | WP_012129029.1 | Uniprot ID | A7N3Z1 |
| Organism | Vibrio campbellii ATCC BAA-1116 | ||
| Function | autoinducer sensor (predicted from homology) Competence regulation |
||
Genomic Context
Location: 574654..585751
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VIBHAR_RS20100 (VIBHAR_05344) | - | 574898..575887 (+) | 990 | WP_012129023.1 | Gfo/Idh/MocA family protein | - |
| VIBHAR_RS20105 (VIBHAR_05345) | - | 575981..577318 (-) | 1338 | WP_012129024.1 | MATE family efflux transporter | - |
| VIBHAR_RS20110 (VIBHAR_05346) | - | 577442..577756 (-) | 315 | WP_005373603.1 | DUF496 family protein | - |
| VIBHAR_RS20115 (VIBHAR_05348) | - | 577995..578198 (+) | 204 | WP_005433391.1 | hypothetical protein | - |
| VIBHAR_RS20120 (VIBHAR_05349) | - | 578292..578945 (+) | 654 | WP_012129027.1 | YceH family protein | - |
| VIBHAR_RS20125 (VIBHAR_05350) | - | 578942..579256 (+) | 315 | WP_012129028.1 | GIY-YIG nuclease family protein | - |
| VIBHAR_RS20130 (VIBHAR_05351) | luxP | 579654..580751 (+) | 1098 | WP_012129029.1 | autoinducer 2-binding periplasmic protein LuxP | Regulator |
| VIBHAR_RS20135 (VIBHAR_05352) | luxQ | 580751..583330 (+) | 2580 | WP_012129030.1 | quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ | - |
| VIBHAR_RS20140 (VIBHAR_05353) | - | 583410..584735 (-) | 1326 | WP_011999187.1 | IS4 family transposase | - |
| VIBHAR_RS20145 (VIBHAR_05354) | - | 584884..585546 (-) | 663 | WP_012129031.1 | PilZ domain-containing protein | - |
Sequence
Protein
Download Length: 365 a.a. Molecular weight: 41457.80 Da Isoelectric Point: 5.6921
>NTDB_id=29047 VIBHAR_RS20130 WP_012129029.1 579654..580751(+) (luxP) [Vibrio campbellii ATCC BAA-1116]
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVRAQPVPLSKPTQRPIKISVVYPGQQVSD
YWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
MKKALLFSLISMVGFSPASQATQVLNGYWGYQEFLDEFPEQRNLTNALSEAVRAQPVPLSKPTQRPIKISVVYPGQQVSD
YWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI
TTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKHTYYSVLYFSEGYISDVRGDTFIHQVNRDNNFELQSAYYTKAT
KQSGYDAAKASLAKHPDVDFIYACSTDVALGAVDALAELGREDIMINGWGGGSAELDAIQKGDLDITVMRMNDDTGIAMA
EAIKWDLEDKPVPTVYSGDFEIVTKADSPERIEALKKRAFRYSDN
Nucleotide
Download Length: 1098 bp
>NTDB_id=29047 VIBHAR_RS20130 WP_012129029.1 579654..580751(+) (luxP) [Vibrio campbellii ATCC BAA-1116]
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAGTTTCCCGAGCAACGAAATCTGACCAATGCTTTATCAGAAGCAGTACGAG
CACAGCCGGTCCCACTGTCTAAACCGACACAACGCCCGATTAAAATATCAGTGGTTTACCCAGGACAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCATCATTCGAAAAACGTTTGTATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCATTAATGGAAGCGCTCAAGAGCAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
AGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGATG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
CGTAGCATTAGGTGCAGTAGACGCACTGGCTGAGTTGGGACGTGAAGATATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGACACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA
ATGAAGAAAGCGTTACTATTTTCCCTGATTTCTATGGTCGGTTTTTCTCCAGCGTCTCAAGCAACACAAGTTTTGAATGG
GTACTGGGGTTATCAAGAGTTTTTGGACGAGTTTCCCGAGCAACGAAATCTGACCAATGCTTTATCAGAAGCAGTACGAG
CACAGCCGGTCCCACTGTCTAAACCGACACAACGCCCGATTAAAATATCAGTGGTTTACCCAGGACAGCAAGTTTCAGAT
TACTGGGTAAGAAATATTGCATCATTCGAAAAACGTTTGTATAAGTTGAATATTAACTACCAACTGAACCAAGTGTTTAC
TCGTCCAAATGCTGATATCAAGCAACAAAGCTTGTCATTAATGGAAGCGCTCAAGAGCAAATCGGATTACTTGATTTTCA
CGCTTGATACGACAAGACACCGTAAATTTGTTGAGCACGTTTTGGACTCAACGAACACCAAATTGATCTTGCAAAATATC
ACTACACCAGTCCGTGAGTGGGACAAACATCAACCGTTTTTATATGTCGGATTTGACCACGCAGAAGGCAGTCGTGAATT
AGCAACAGAATTCGGAAAGTTCTTCCCAAAACACACATATTACAGTGTGCTCTACTTTTCTGAAGGTTATATTAGCGATG
TGAGAGGTGATACTTTTATTCACCAAGTAAACCGTGATAATAACTTTGAGCTACAATCAGCGTATTACACGAAGGCAACC
AAGCAATCCGGCTATGATGCTGCGAAAGCGAGTTTAGCAAAACATCCAGATGTTGATTTTATCTATGCATGTTCGACCGA
CGTAGCATTAGGTGCAGTAGACGCACTGGCTGAGTTGGGACGTGAAGATATTATGATCAATGGCTGGGGTGGAGGCTCTG
CTGAGTTAGACGCTATCCAGAAGGGTGATTTAGACATCACCGTCATGCGTATGAATGATGACACTGGCATAGCCATGGCA
GAAGCGATTAAGTGGGACTTGGAAGATAAACCAGTTCCGACCGTATACTCAGGTGACTTTGAAATCGTAACAAAGGCAGA
TTCACCGGAGAGAATCGAAGCGCTGAAAAAGCGCGCATTTAGATATTCAGATAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxP | Vibrio cholerae strain A1552 |
62.912 |
99.726 |
0.627 |