Detailed information NTG0029032

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: VIBHAR_RS13820
• Genome accession: NC_009783
• Coordinates: 2982069..2983472 (-)
• Length: 467 a.a.
• NCBI ID: WP_012128494.1
• Uniprot ID: A7MVC2
• Organism: Vibrio campbellii ATCC BAA-1116
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 2977069..2988472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VIBHAR_RS13800 (VIBHAR_02955)	-	2978344..2979249 (+)	906	WP_012128491.1	YvcK family protein	-
VIBHAR_RS13805 (VIBHAR_02956)	tnpC	2979268..2980812 (-)	1545	WP_021018019.1	IS66 family transposase	-
VIBHAR_RS30330	tnpB	2980873..2981226 (-)	354	WP_011998779.1	IS66 family insertion sequence element accessory protein TnpB	-
VIBHAR_RS30335	tnpA	2981239..2981520 (-)	282	Protein_2667	IS66 family insertion sequence element accessory protein TnpA	-
VIBHAR_RS13815 (VIBHAR_02958)	luxU	2981728..2982072 (-)	345	WP_012128493.1	quorum-sensing phosphorelay protein LuxU	-
VIBHAR_RS13820 (VIBHAR_02959)	luxO	2982069..2983472 (-)	1404	WP_012128494.1	quorum-sensing sigma-54 dependent transcriptional regulator LuxO	Regulator
VIBHAR_RS13830 (VIBHAR_02961)	uvrB	2983815..2985845 (-)	2031	WP_005531398.1	excinuclease ABC subunit UvrB	-

Sequence

Protein

• Length: 467 a.a.
• Molecular weight: 52135.71 Da
• Isoelectric Point: 6.2518

>NTDB_id=29032 VIBHAR_RS13820 WP_012128494.1 2982069..2983472(-) (luxO) [Vibrio campbellii ATCC BAA-1116]
MQQITEGQKSRYLLMVEDTASVAALYRSYLTPLGIDINIVGTGRDAIESLNHRIPDLILLDLRLPDMTGMDVLHAVKKSH
PDVPIIFMTAHGSIDTAVEAMRHGSQDFLIKPCEADRLRVTVNNAIRKATKLKNEADNPGNQNYQGFIGSSQTMQQVYRT
IDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAANDRQGAAELADG
GTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRE
RGKDVIEIAYSLLGYMSHEEGKSFVRFAQDVIERFNSYEWPGNVRQLQNVLRNIVVLNNGKEITLDMLPPPLNQPVVRQS
VAKFIEPDIMTVSDIMPLWMTEKMAIEQAIQACEGNIPRAAGYLDVSPSTIYRKLQAWNSKDEKQNV

Nucleotide

• Length: 1404 bp

>NTDB_id=29032 VIBHAR_RS13820 WP_012128494.1 2982069..2983472(-) (luxO) [Vibrio campbellii ATCC BAA-1116]
ATGCAACAAATAACAGAAGGTCAAAAGTCTCGTTATCTACTTATGGTAGAAGACACCGCATCCGTTGCGGCACTTTACCG
CTCTTACCTCACGCCACTTGGCATCGATATCAATATTGTTGGAACAGGCAGAGACGCCATTGAAAGCCTGAACCATCGCA
TTCCTGATCTTATTCTGCTCGATCTTCGTCTACCTGATATGACGGGGATGGACGTATTGCACGCGGTGAAGAAAAGCCAC
CCAGACGTGCCAATCATCTTCATGACAGCCCATGGTTCTATCGATACTGCGGTAGAGGCGATGCGCCACGGTTCTCAAGA
CTTCCTAATCAAACCATGTGAAGCAGACCGTTTACGTGTCACGGTGAACAATGCGATCCGTAAAGCAACCAAATTAAAGA
ATGAAGCTGACAACCCCGGTAACCAAAATTACCAAGGCTTCATCGGCAGTAGCCAAACGATGCAGCAGGTTTACCGCACC
ATTGACTCGGCAGCGAGCAGTAAAGCGAGTATTTTCATCACGGGTGAAAGTGGTACGGGTAAAGAAGTGTGTGCCGAAGC
GATTCACGCAGCAAGCAAACGCGGTGATAAGCCGTTTATCGCCATCAACTGTGCGGCAATCCCGAAAGACCTTATTGAAA
GTGAGCTGTTTGGTCACGTAAAAGGTGCGTTTACTGGTGCTGCGAATGACCGACAAGGTGCGGCAGAGCTTGCTGATGGC
GGCACCTTGTTCCTTGATGAACTCTGTGAAATGGACTTGGATCTTCAAACTAAGCTATTGCGCTTTATCCAAACGGGTAC
ATTCCAAAAAGTCGGTTCTTCTAAAATGAAGAGCGTGGATGTGCGCTTTGTGTGTGCAACTAACCGAGACCCTTGGAAAG
AAGTGCAAGAAGGCCGTTTCCGTGAAGACTTGTATTACCGTTTGTACGTGATTCCTTTGCACCTTCCGCCGCTGCGTGAG
CGTGGTAAAGACGTTATTGAAATTGCATACTCGTTGCTTGGTTATATGTCTCATGAGGAAGGTAAGAGTTTCGTCCGTTT
CGCACAAGACGTGATTGAAAGATTCAACAGCTACGAATGGCCGGGTAACGTTCGCCAGTTGCAAAACGTATTGCGTAATA
TCGTGGTACTGAACAATGGCAAAGAGATCACGCTGGATATGTTACCGCCACCACTGAATCAGCCTGTTGTGCGCCAATCG
GTAGCAAAATTCATTGAACCTGACATTATGACGGTGTCAGATATTATGCCGCTTTGGATGACAGAGAAAATGGCTATTGA
GCAGGCAATTCAAGCGTGTGAAGGCAACATTCCACGCGCTGCTGGCTATTTGGATGTTAGTCCATCAACGATTTATCGCA
AGTTGCAAGCTTGGAATAGCAAGGACGAAAAACAAAACGTATGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (418-458)

• Response regulator receiver domain (Response_reg) (14-122)

• Sigma-54 interaction domain (Sigma54_activat) (148-313)

3D structure

• AlphaFold DB: A7MVC2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	86.384	95.931	0.829