Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   CSC50_RS09470 Genome accession   NZ_CP029082
Coordinates   1767732..1768775 (+) Length   347 a.a.
NCBI ID   WP_108720648.1    Uniprot ID   -
Organism   Staphylococcus aureus strain AR465     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1762732..1773775
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSC50_RS09430 - 1763158..1763268 (+) 111 WP_001790257.1 hypothetical protein -
  CSC50_RS09435 (CSC50_1701) - 1763297..1763710 (+) 414 WP_001557448.1 hypothetical protein -
  CSC50_RS09445 (CSC50_1702) - 1764141..1765127 (-) 987 WP_000999717.1 aromatic acid exporter family protein -
  CSC50_RS09455 (CSC50_1703) map 1765658..1766416 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  CSC50_RS09460 (CSC50_1704) - 1766633..1767019 (+) 387 WP_001110179.1 hypothetical protein -
  CSC50_RS09465 (CSC50_1705) liaF 1767034..1767735 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  CSC50_RS09470 (CSC50_1706) vraS 1767732..1768775 (+) 1044 WP_108720648.1 sensor histidine kinase Regulator
  CSC50_RS09475 (CSC50_1707) vraR 1768765..1769394 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  CSC50_RS09480 (CSC50_1708) - 1769507..1770724 (-) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  CSC50_RS09485 (CSC50_1709) - 1771002..1771277 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  CSC50_RS09490 (CSC50_1710) - 1771284..1771748 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  CSC50_RS09495 (CSC50_1711) - 1771895..1772095 (+) 201 WP_000180460.1 DUF1128 family protein -
  CSC50_RS09500 (CSC50_1712) - 1772098..1773354 (+) 1257 WP_001795108.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40072.57 Da        Isoelectric Point: 6.0577

>NTDB_id=290172 CSC50_RS09470 WP_108720648.1 1767732..1768775(+) (vraS) [Staphylococcus aureus strain AR465]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERVLEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=290172 CSC50_RS09470 WP_108720648.1 1767732..1768775(+) (vraS) [Staphylococcus aureus strain AR465]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGTTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment