Detailed information NTG0290116

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: EJ992_RS06280
• Genome accession: NZ_CP034569
• Coordinates: 1263142..1264059 (+)
• Length: 305 a.a.
• NCBI ID: WP_003180613.1
• Uniprot ID: A0AA90ETR0
• Organism: Bacillus licheniformis strain ATCC 14580
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1258142..1269059

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJ992_RS06260 (EJ992_06260)	trpS	1258753..1259745 (-)	993	WP_011197767.1	tryptophan--tRNA ligase	-
EJ992_RS06270 (EJ992_06270)	-	1260481..1262106 (+)	1626	WP_011197768.1	peptide ABC transporter substrate-binding protein	-
EJ992_RS06275 (EJ992_06275)	-	1262202..1263137 (+)	936	WP_003180611.1	ABC transporter permease	-
EJ992_RS06280 (EJ992_06280)	amiD	1263142..1264059 (+)	918	WP_003180613.1	ABC transporter permease	Regulator
EJ992_RS06285 (EJ992_06285)	-	1264073..1265140 (+)	1068	WP_003180615.1	ABC transporter ATP-binding protein	-
EJ992_RS06290 (EJ992_06290)	-	1265142..1266065 (+)	924	WP_011197769.1	ABC transporter ATP-binding protein	-
EJ992_RS06295 (EJ992_06295)	-	1266296..1266874 (+)	579	WP_003180619.1	GNAT family N-acetyltransferase	-
EJ992_RS06300 (EJ992_06300)	spxA	1267052..1267447 (+)	396	WP_009328833.1	transcriptional regulator SpxA	-
EJ992_RS06305 (EJ992_06305)	-	1267670..1268332 (-)	663	WP_009328832.1	TerC family protein	-
EJ992_RS06310 (EJ992_06310)	-	1268508..1268636 (+)	129	Protein_1181	hypothetical protein	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33952.29 Da
• Isoelectric Point: 8.8249

>NTDB_id=290116 EJ992_RS06280 WP_003180613.1 1263142..1264059(+) (amiD) [Bacillus licheniformis strain ATCC 14580]
MQQIPKDMFEPAAVDHSEAEKISKKNLSFWTDVFLRFKENKLALFGLVVLILIALMAIFAPVFSSFQYEETDLTNANQPP
SGEHWFGTDDLGRDVFVRTWVGARISLTIGLAAALIDVLIGVIWGAISGIRGGRTDEIMMRIADILWAIPSLLMTILLLV
VMGKGLITMIVAMVITGWINMARIVRGQVLQLKNQEFVLASRTLGAKNSRIIRKHLLPNIMSPILVTMTLTVPTAIFYEA
FLSYLGLGVPQPLASWGTMATDGVQGLEYYPWRLFFPATFICLTMFAFNVIGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=290116 EJ992_RS06280 WP_003180613.1 1263142..1264059(+) (amiD) [Bacillus licheniformis strain ATCC 14580]
ATGCAGCAAATACCAAAAGACATGTTTGAACCTGCAGCTGTTGACCATAGCGAAGCCGAAAAGATCTCAAAGAAAAACCT
TTCTTTTTGGACAGACGTATTCTTGAGATTTAAAGAAAACAAGCTGGCGCTGTTTGGACTGGTGGTTCTGATCCTGATCG
CTCTGATGGCTATCTTCGCGCCGGTGTTCTCAAGCTTTCAATATGAAGAAACAGATTTAACGAATGCGAACCAGCCGCCA
AGCGGTGAGCACTGGTTTGGAACAGATGACCTTGGAAGGGACGTATTCGTCCGTACATGGGTCGGCGCCCGCATCTCGCT
GACAATCGGACTCGCTGCTGCGCTGATCGACGTTTTGATCGGTGTGATATGGGGTGCGATTTCCGGCATCAGAGGCGGAC
GTACGGATGAAATTATGATGAGAATAGCAGATATTTTATGGGCGATTCCTTCTTTATTAATGACCATCCTGCTGCTCGTT
GTTATGGGAAAAGGCCTGATCACGATGATCGTGGCGATGGTTATTACGGGCTGGATCAACATGGCGAGAATCGTCCGGGG
CCAAGTACTCCAGCTTAAAAATCAGGAGTTCGTACTCGCCTCAAGAACATTGGGAGCGAAAAACTCGCGCATTATCAGAA
AGCACCTGCTGCCCAACATCATGAGCCCGATCTTGGTCACCATGACATTAACCGTTCCTACGGCTATTTTCTATGAGGCG
TTTTTAAGCTACCTCGGCCTCGGGGTTCCGCAGCCGCTTGCAAGCTGGGGAACGATGGCAACAGACGGTGTTCAGGGATT
GGAATACTACCCTTGGCGCCTGTTCTTCCCGGCTACTTTTATCTGTCTGACCATGTTTGCATTCAACGTTATCGGCGACG
GACTGCGCGACGCTTTAGATCCGAAGCTGCGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-80)

3D structure

• AlphaFold DB: A0AA90ETR0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	35.922	100	0.364
amiD	Streptococcus thermophilus LMG 18311	35.599	100	0.361
amiD	Streptococcus thermophilus LMD-9	35.599	100	0.361