Detailed information NTG0289942

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: DDT09_RS05705
• Genome accession: NZ_CP029070
• Coordinates: 1104332..1105285 (+)
• Length: 317 a.a.
• NCBI ID: WP_014417407.1
• Uniprot ID: A0AAP4DIE0
• Organism: Bacillus amyloliquefaciens strain ALB69
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1099332..1110285

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDT09_RS05675 (DDT09_05675)	argF	1101150..1102121 (+)	972	WP_017417442.1	ornithine carbamoyltransferase	-
DDT09_RS05680 (DDT09_05680)	-	1102196..1102375 (+)	180	WP_003155070.1	YjzC family protein	-
DDT09_RS05685 (DDT09_05685)	-	1102412..1102597 (-)	186	WP_007409129.1	YjzD family protein	-
DDT09_RS05695 (DDT09_05695)	-	1102858..1103592 (+)	735	WP_022553564.1	hypothetical protein	-
DDT09_RS05700 (DDT09_05700)	-	1103675..1104241 (+)	567	WP_017417444.1	hypothetical protein	-
DDT09_RS05705 (DDT09_05705)	med	1104332..1105285 (+)	954	WP_014417407.1	BMP family ABC transporter substrate-binding protein	Regulator
DDT09_RS05710 (DDT09_05710)	comZ	1105298..1105489 (+)	192	WP_003155061.1	ComZ family protein	Regulator
DDT09_RS05715 (DDT09_05715)	-	1105518..1105736 (-)	219	WP_007409123.1	hypothetical protein	-
DDT09_RS05720 (DDT09_05720)	-	1105903..1106841 (+)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
DDT09_RS05725 (DDT09_05725)	fabF	1106864..1108102 (+)	1239	WP_021494977.1	beta-ketoacyl-ACP synthase II	-
DDT09_RS05730 (DDT09_05730)	-	1108185..1108970 (+)	786	WP_012117278.1	DUF2268 domain-containing protein	-
DDT09_RS05735 (DDT09_05735)	-	1109144..1110130 (+)	987	WP_061862067.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35343.93 Da
• Isoelectric Point: 4.6686

>NTDB_id=289942 DDT09_RS05705 WP_014417407.1 1104332..1105285(+) (med) [Bacillus amyloliquefaciens strain ALB69]
MITRLVMTFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=289942 DDT09_RS05705 WP_014417407.1 1104332..1105285(+) (med) [Bacillus amyloliquefaciens strain ALB69]
TTGATCACCAGGCTTGTCATGACCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGGACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATTTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGCGTCATCGCCTCTTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGAGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTCGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	77.918	100	0.779