Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BAALB65_RS07620 Genome accession   NZ_CP029069
Coordinates   1429790..1430386 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens strain ALB65     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1424790..1435386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAALB65_RS07590 (BAALB65_07590) - 1425004..1425459 (+) 456 WP_007409622.1 flavodoxin -
  BAALB65_RS07595 (BAALB65_07595) dapD 1425541..1426251 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BAALB65_RS07600 (BAALB65_07600) - 1426322..1427446 (+) 1125 WP_109566909.1 N-acetyldiaminopimelate deacetylase -
  BAALB65_RS07605 (BAALB65_07605) - 1427507..1427752 (+) 246 WP_003154596.1 YkuS family protein -
  BAALB65_RS07610 (BAALB65_07610) - 1427786..1428592 (-) 807 WP_021493755.1 mechanosensitive ion channel family protein -
  BAALB65_RS07615 (BAALB65_07615) - 1428880..1429338 (+) 459 WP_017417682.1 TlpA disulfide reductase family protein -
  BAALB65_RS07620 (BAALB65_07620) rok 1429790..1430386 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  BAALB65_RS07625 (BAALB65_07625) - 1430407..1431399 (-) 993 WP_109566910.1 sporulation protein -
  BAALB65_RS07630 (BAALB65_07630) - 1431545..1432147 (+) 603 WP_014417620.1 molybdenum cofactor guanylyltransferase -
  BAALB65_RS07635 (BAALB65_07635) - 1432199..1433218 (+) 1020 WP_007611113.1 molybdopterin-synthase adenylyltransferase MoeB -
  BAALB65_RS07640 (BAALB65_07640) glp 1433236..1434528 (+) 1293 WP_095271781.1 gephyrin-like molybdotransferase Glp -
  BAALB65_RS07645 (BAALB65_07645) mobB 1434489..1435010 (+) 522 WP_021493752.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=289874 BAALB65_RS07620 WP_003154591.1 1429790..1430386(+) (rok) [Bacillus amyloliquefaciens strain ALB65]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=289874 BAALB65_RS07620 WP_003154591.1 1429790..1430386(+) (rok) [Bacillus amyloliquefaciens strain ALB65]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTAAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCAGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATACCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843

Multiple sequence alignment