Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BAALB65_RS07520 Genome accession   NZ_CP029069
Coordinates   1413925..1414389 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus amyloliquefaciens strain ALB65     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1408925..1419389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAALB65_RS07500 (BAALB65_07500) - 1409406..1411226 (+) 1821 WP_021493759.1 PAS domain-containing protein -
  BAALB65_RS07505 (BAALB65_07505) - 1411251..1412420 (-) 1170 WP_109566906.1 aminotransferase A -
  BAALB65_RS20295 - 1412621..1412782 (-) 162 WP_007409608.1 hypothetical protein -
  BAALB65_RS07515 (BAALB65_07515) cheV 1412971..1413882 (+) 912 WP_029973673.1 chemotaxis protein CheV -
  BAALB65_RS07520 (BAALB65_07520) kre 1413925..1414389 (-) 465 WP_003154622.1 YkyB family protein Regulator
  BAALB65_RS07525 (BAALB65_07525) - 1414512..1415804 (-) 1293 WP_014417606.1 MFS transporter -
  BAALB65_RS07530 (BAALB65_07530) - 1415880..1416374 (-) 495 WP_094296114.1 L,D-transpeptidase family protein -
  BAALB65_RS07535 (BAALB65_07535) - 1416449..1417312 (-) 864 WP_095059970.1 metallophosphoesterase -
  BAALB65_RS07540 (BAALB65_07540) fadH 1417456..1418220 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  BAALB65_RS07545 (BAALB65_07545) - 1418334..1418882 (+) 549 WP_109566907.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=289873 BAALB65_RS07520 WP_003154622.1 1413925..1414389(-) (kre) [Bacillus amyloliquefaciens strain ALB65]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=289873 BAALB65_RS07520 WP_003154622.1 1413925..1414389(-) (kre) [Bacillus amyloliquefaciens strain ALB65]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment