Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   EJF26_RS02410 Genome accession   NZ_CP034442
Coordinates   455758..456222 (+) Length   154 a.a.
NCBI ID   WP_001135775.1    Uniprot ID   A0ABT6PFA9
Organism   Streptococcus oralis subsp. dentisani strain F0392     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 450758..461222
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EJF26_RS02380 - 451233..452147 (+) 915 WP_001178528.1 hypothetical protein -
  EJF26_RS02385 - 452270..452812 (+) 543 WP_001137922.1 ClbS/DfsB family four-helix bundle protein -
  EJF26_RS09995 - 453097..453600 (+) 504 WP_004246015.1 hypothetical protein -
  EJF26_RS02395 - 453691..454305 (+) 615 WP_001166738.1 hypothetical protein -
  EJF26_RS02400 - 454341..455033 (+) 693 WP_001146404.1 YjjG family noncanonical pyrimidine nucleotidase -
  EJF26_RS02405 - 455095..455748 (+) 654 WP_001164850.1 uracil-DNA glycosylase -
  EJF26_RS02410 mutX 455758..456222 (+) 465 WP_001135775.1 8-oxo-dGTP diphosphatase Machinery gene
  EJF26_RS02415 - 456235..457503 (+) 1269 WP_000924527.1 dihydroorotase -
  EJF26_RS02420 - 457545..458885 (+) 1341 WP_000283628.1 MATE family efflux transporter -
  EJF26_RS02425 - 459064..460032 (+) 969 WP_000105365.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  EJF26_RS02430 - 460049..461041 (+) 993 WP_000448711.1 alpha-ketoacid dehydrogenase subunit beta -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17826.19 Da        Isoelectric Point: 4.2350

>NTDB_id=289743 EJF26_RS02410 WP_001135775.1 455758..456222(+) (mutX) [Streptococcus oralis subsp. dentisani strain F0392]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGELIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=289743 EJF26_RS02410 WP_001135775.1 455758..456222(+) (mutX) [Streptococcus oralis subsp. dentisani strain F0392]
ATGCCTCAGTTAGCGACGATTTGCTACATTGATAACGGAAAAGAACTGCTCATGCTCCATCGTAATAAGAAGCCTAATGA
TGTCCACGAAGGCAAATGGATTGGCGTGGGTGGTAAGCTAGAGCGAGGAGAGACACCTCAGGAGTGCGCAGCGCGTGAAA
TCCTCGAAGAGACAGGCCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCAGAATTCACGCCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACAGAGTTTGAAGGTGAGTTGATTGACTGCAATGAGGGGACGCTGGAATGGGTTCC
CTATGATGAAGTTTTGAGCAAGCCAACTTGGGAGGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGACAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTATTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.052

100

0.981