Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | DCO55_RS05650 | Genome accession | NZ_CP029053 |
| Coordinates | 1072841..1073143 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain c021 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1067841..1078143
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DCO55_RS05625 (DCO55_05745) | rpsR | 1068203..1068463 (+) | 261 | WP_253683852.1 | 30S ribosomal protein S18 | - |
| DCO55_RS05630 (DCO55_05750) | lon | 1068524..1070899 (-) | 2376 | WP_052779714.1 | endopeptidase La | - |
| DCO55_RS05635 (DCO55_05755) | - | 1070916..1071563 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| DCO55_RS05640 (DCO55_05760) | fliW | 1071724..1072113 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| DCO55_RS05645 (DCO55_05765) | proC | 1072113..1072844 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| DCO55_RS05650 (DCO55_05770) | ctsT | 1072841..1073143 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| DCO55_RS05655 (DCO55_05775) | - | 1073140..1073802 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| DCO55_RS05660 (DCO55_05780) | - | 1073799..1074251 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| DCO55_RS05665 (DCO55_05785) | hemD | 1074248..1074877 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| DCO55_RS05670 (DCO55_05790) | thiE | 1074855..1075487 (-) | 633 | WP_002867188.1 | thiamine phosphate synthase | - |
| DCO55_RS05675 (DCO55_05795) | thiD | 1075477..1076289 (-) | 813 | WP_253683854.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| DCO55_RS05680 (DCO55_05800) | - | 1076286..1076972 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| DCO55_RS05685 (DCO55_05805) | - | 1076969..1077730 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=289715 DCO55_RS05650 WP_002853046.1 1072841..1073143(+) (ctsT) [Campylobacter jejuni strain c021]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=289715 DCO55_RS05650 WP_002853046.1 1072841..1073143(+) (ctsT) [Campylobacter jejuni strain c021]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |