Detailed information    

insolico Bioinformatically predicted

Overview


Name   sxy/tfoX   Type   Regulator
Locus tag   AXD24_RS15120 Genome accession   NZ_CP029039
Coordinates   2896850..2897455 (-) Length   201 a.a.
NCBI ID   WP_001202375.1    Uniprot ID   A0A5I0N148
Organism   Salmonella enterica subsp. enterica serovar Montevideo strain CFSAN045764     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context


Location: 2891850..2902455
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AXD24_RS15105 (AXD24_15105) helD 2892067..2894121 (-) 2055 WP_000420515.1 DNA helicase IV -
  AXD24_RS15110 (AXD24_15110) - 2894245..2894691 (+) 447 WP_001261222.1 YccF domain-containing protein -
  AXD24_RS15115 (AXD24_15115) yccS 2894710..2896863 (+) 2154 WP_000950879.1 YccS family putative transporter -
  AXD24_RS15120 (AXD24_15120) sxy/tfoX 2896850..2897455 (-) 606 WP_001202375.1 TfoX/Sxy family DNA transformation protein Regulator
  AXD24_RS15125 (AXD24_15125) sulA 2897672..2898181 (+) 510 WP_000288730.1 SOS-induced cell division inhibitor SulA -
  AXD24_RS15130 (AXD24_15130) ompA 2898538..2899590 (+) 1053 WP_001562588.1 porin OmpA -
  AXD24_RS15135 (AXD24_15135) matP 2899662..2900114 (-) 453 WP_000877172.1 macrodomain Ter protein MatP -
  AXD24_RS15140 (AXD24_15140) - 2900300..2902060 (+) 1761 WP_000156463.1 Lon protease family protein -

Sequence


Protein


Download         Length: 201 a.a.        Molecular weight: 23174.94 Da        Isoelectric Point: 8.7403

>NTDB_id=289629 AXD24_RS15120 WP_001202375.1 2896850..2897455(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Montevideo strain CFSAN045764]
MRALSYDRIYKSQEYLASLGTIQYRSLFGSYSLTVEDTVFAMVANGELYLRACEESVPYCVKHPPAWLMFMKCGRPVMLN
YYRVDESLWRDQQQLVRLSKYSLDAAMKEKHSRILQHRLKDLPNMTFHLETLLNESGIKDENMLRILGAKMCWLRLRQSN
PLLTVKVLYALEGAIVGVHEAALPASRRQELADWAHSLTAG

Nucleotide


Download         Length: 606 bp        

>NTDB_id=289629 AXD24_RS15120 WP_001202375.1 2896850..2897455(-) (sxy/tfoX) [Salmonella enterica subsp. enterica serovar Montevideo strain CFSAN045764]
ATGAGAGCACTCTCTTATGACAGGATCTATAAATCGCAAGAATATTTGGCCTCTTTGGGGACGATCCAGTATCGATCTTT
ATTCGGTAGCTATAGTCTGACCGTGGAGGATACCGTCTTTGCGATGGTGGCTAATGGCGAGCTTTATCTCCGCGCCTGTG
AAGAAAGCGTACCCTACTGTGTGAAGCATCCTCCCGCCTGGCTCATGTTTATGAAATGTGGACGTCCCGTTATGCTCAAC
TATTACCGGGTGGATGAAAGCCTGTGGCGCGATCAGCAGCAGCTGGTACGTTTATCGAAGTATTCTCTTGACGCGGCAAT
GAAGGAAAAACACAGCCGTATTTTACAGCACAGACTCAAAGATCTCCCCAATATGACCTTCCATCTGGAAACATTGCTCA
ATGAGTCAGGGATAAAGGACGAAAATATGTTACGCATACTGGGCGCGAAAATGTGCTGGCTAAGGTTGCGACAAAGCAAT
CCCTTGCTGACGGTGAAAGTTTTGTATGCCCTGGAAGGCGCAATTGTCGGCGTACATGAAGCGGCGCTCCCGGCGAGTCG
TCGCCAGGAGCTTGCCGACTGGGCTCATTCGCTTACGGCTGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5I0N148

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

75.879

99.005

0.751


Multiple sequence alignment