Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   DDE72_RS01945 Genome accession   NZ_CP029034
Coordinates   372708..375008 (+) Length   766 a.a.
NCBI ID   WP_032876801.1    Uniprot ID   -
Organism   Bacillus velezensis strain LDO2     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 367708..380008
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DDE72_RS01910 (DDE72_01910) - 367711..369177 (+) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  DDE72_RS01915 (DDE72_01915) - 369307..370530 (+) 1224 WP_032876792.1 EAL and HDOD domain-containing protein -
  DDE72_RS01920 (DDE72_01920) - 370537..370878 (-) 342 WP_032876795.1 hypothetical protein -
  DDE72_RS01930 (DDE72_01930) degQ 371344..371484 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  DDE72_RS01935 (DDE72_01935) - 371692..372552 (+) 861 WP_142925231.1 polyprenyl synthetase family protein -
  DDE72_RS01940 (DDE72_01940) comX 372521..372694 (+) 174 WP_012118314.1 competence pheromone ComX -
  DDE72_RS01945 (DDE72_01945) comP 372708..375008 (+) 2301 WP_032876801.1 histidine kinase Regulator
  DDE72_RS01950 (DDE72_01950) comA 375089..375733 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  DDE72_RS01955 (DDE72_01955) - 375755..376138 (+) 384 WP_007613430.1 hotdog fold thioesterase -
  DDE72_RS01960 (DDE72_01960) mnhG 376178..376552 (-) 375 WP_007613429.1 monovalent cation/H(+) antiporter subunit G -
  DDE72_RS01965 (DDE72_01965) - 376536..376820 (-) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  DDE72_RS01970 (DDE72_01970) - 376820..377296 (-) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  DDE72_RS01975 (DDE72_01975) - 377302..378783 (-) 1482 WP_032876804.1 Na+/H+ antiporter subunit D -
  DDE72_RS01980 (DDE72_01980) - 378776..379117 (-) 342 WP_032876807.1 Na(+)/H(+) antiporter subunit C -
  DDE72_RS01985 (DDE72_01985) - 379117..379548 (-) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88316.54 Da        Isoelectric Point: 7.1786

>NTDB_id=289478 DDE72_RS01945 WP_032876801.1 372708..375008(+) (comP) [Bacillus velezensis strain LDO2]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITVGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNVRYFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGTKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGC
NQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=289478 DDE72_RS01945 WP_032876801.1 372708..375008(+) (comP) [Bacillus velezensis strain LDO2]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTATTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATTAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTAAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTACCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTTGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTAATAGCTCTATTTTTCATTACTGTAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGACAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAGCAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAAGTAGAAGGAGACTTAAATGTAAGGTATTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAAATAGTTCAAGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCACTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACTTGGGATGAGATTTCTTGGTTAAAAACCTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTGCGTCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCACAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCAC
AGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGC
AATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGGCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACG
GATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

56.471

99.869

0.564


Multiple sequence alignment