Detailed information
Bioinformatically predicted
Overview
| Name | luxS | Type | Regulator |
| Locus tag | EJC75_RS12305 | Genome accession | NZ_CP034404 |
| Coordinates | 2145450..2145965 (-) | Length | 171 a.a. |
| NCBI ID | WP_001130210.1 | Uniprot ID | B6I678 |
| Organism | Escherichia coli strain CRE10 | ||
| Function | induction of competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2140450..2150965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJC75_RS12280 (EJC75_12280) | ygaZ | 2140849..2141586 (+) | 738 | WP_000445658.1 | L-valine exporter subunit YgaZ | - |
| EJC75_RS12285 (EJC75_12285) | ygaH | 2141576..2141911 (+) | 336 | WP_000119767.1 | L-valine transporter subunit YgaH | - |
| EJC75_RS12290 (EJC75_12290) | emrR | 2142002..2142532 (+) | 531 | WP_000378442.1 | multidrug efflux transporter EmrAB transcriptional repressor EmrR | - |
| EJC75_RS12295 (EJC75_12295) | emrA | 2142659..2143831 (+) | 1173 | WP_001348400.1 | multidrug efflux MFS transporter periplasmic adaptor subunit EmrA | - |
| EJC75_RS12300 (EJC75_12300) | emrB | 2143848..2145386 (+) | 1539 | WP_001295176.1 | multidrug efflux MFS transporter permease subunit EmrB | - |
| EJC75_RS12305 (EJC75_12305) | luxS | 2145450..2145965 (-) | 516 | WP_001130210.1 | S-ribosylhomocysteine lyase | Regulator |
| EJC75_RS12310 (EJC75_12310) | gshA | 2146115..2147671 (-) | 1557 | WP_000611802.1 | glutamate--cysteine ligase | - |
| EJC75_RS12315 (EJC75_12315) | yqaA | 2147744..2148172 (-) | 429 | WP_001287457.1 | YqaA family protein | - |
| EJC75_RS12320 (EJC75_12320) | yqaB | 2148169..2148735 (-) | 567 | WP_000273305.1 | fructose-1-phosphate/6-phosphogluconate phosphatase | - |
| EJC75_RS12350 (EJC75_12350) | csrA | 2150193..2150378 (-) | 186 | WP_000906486.1 | carbon storage regulator CsrA | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19417.13 Da Isoelectric Point: 4.7556
>NTDB_id=289475 EJC75_RS12305 WP_001130210.1 2145450..2145965(-) (luxS) [Escherichia coli strain CRE10]
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPNKEVMPERGIHTLEHLFAGFMRNHLNGNGVEIIDISP
MGCRTGFYMSLIGTPDEQRVADAWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
LPEEKLQELHI
Nucleotide
Download Length: 516 bp
>NTDB_id=289475 EJC75_RS12305 WP_001130210.1 2145450..2145965(-) (luxS) [Escherichia coli strain CRE10]
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
ATGCCGTTGTTAGATAGCTTCACAGTCGATCATACCCGGATGGAAGCGCCTGCAGTTCGGGTGGCGAAAACAATGAACAC
CCCGCATGGCGACGCAATCACCGTGTTCGATCTGCGCTTCTGCGTGCCGAACAAAGAAGTGATGCCAGAAAGAGGGATCC
ATACCCTGGAGCACCTGTTTGCTGGTTTTATGCGTAACCATCTTAACGGTAATGGTGTAGAGATTATCGATATCTCGCCA
ATGGGCTGCCGCACCGGTTTTTATATGAGTCTGATTGGTACGCCAGATGAGCAGCGTGTTGCTGATGCCTGGAAAGCGGC
AATGGAAGACGTGCTGAAAGTGCAGGATCAGAATCAGATCCCGGAACTGAACGTCTACCAGTGTGGCACTTACCAGATGC
ACTCGTTGCAGGAAGCGCAGGATATTGCGCGTAGCATTCTGGAACGTGACGTGCGCATCAACAGCAACGAAGAACTGGCG
CTGCCGGAAGAGAAGTTGCAGGAACTGCACATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| luxS | Vibrio cholerae strain A1552 |
73.684 |
100 |
0.737 |