Detailed information NTG0289423

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: EJJ14_RS06170
• Genome accession: NZ_CP034393
• Coordinates: 1173448..1174398 (+)
• Length: 316 a.a.
• NCBI ID: WP_002867402.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain CLB104
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1168448..1179398

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EJJ14_RS06150 (EJJ14_06150)	galE	1169266..1170240 (-)	975	WP_002867406.1	UDP-glucose 4-epimerase GalE	-
EJJ14_RS06155 (EJJ14_06155)	-	1170237..1171535 (-)	1299	WP_002867405.1	UDP-glucose/GDP-mannose dehydrogenase family protein	-
EJJ14_RS06160 (EJJ14_06160)	-	1171541..1172497 (-)	957	WP_002867404.1	UDP-glucuronic acid decarboxylase family protein	-
EJJ14_RS06165 (EJJ14_06165)	-	1172568..1173389 (-)	822	WP_002867403.1	glycosyltransferase family 2 protein	-
EJJ14_RS06170 (EJJ14_06170)	waaF	1173448..1174398 (+)	951	WP_002867402.1	lipopolysaccharide heptosyltransferase II	Regulator
EJJ14_RS06175 (EJJ14_06175)	-	1174384..1175148 (-)	765	WP_002867401.1	glycosyltransferase family 25 protein	-
EJJ14_RS06180 (EJJ14_06180)	gmhA	1175148..1175708 (-)	561	WP_002867400.1	D-sedoheptulose 7-phosphate isomerase	-
EJJ14_RS06185 (EJJ14_06185)	rfaE1	1175705..1177090 (-)	1386	WP_002867399.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
EJJ14_RS06190 (EJJ14_06190)	rfaD	1177083..1178036 (-)	954	WP_002867398.1	ADP-glyceromanno-heptose 6-epimerase	-
EJJ14_RS06195 (EJJ14_06195)	gmhB	1178037..1178598 (-)	562	Protein_1212	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
EJJ14_RS06200 (EJJ14_06200)	-	1178679..1178981 (+)	303	WP_002852762.1	cytochrome c	-
EJJ14_RS06205 (EJJ14_06205)	ccoS	1179004..1179210 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 316 a.a.
• Molecular weight: 36324.91 Da
• Isoelectric Point: 10.3207

>NTDB_id=289423 EJJ14_RS06170 WP_002867402.1 1173448..1174398(+) (waaF) [Campylobacter jejuni subsp. jejuni strain CLB104]
MKIFIHLPTWLGDAVMASPALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFKSPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNQNARWVHLDLACMPCMQKTCPLKHHKCMKDLKPEVILKAIQNLTNI

Nucleotide

• Length: 951 bp

>NTDB_id=289423 EJJ14_RS06170 WP_002867402.1 1173448..1174398(+) (waaF) [Campylobacter jejuni subsp. jejuni strain CLB104]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCCCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTAAAAGCCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACTATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAATGCAAGATGGGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAACCTGAAGTGATTTTAAAGGCAATTCAAAATTTAACTAATATCTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	92.652	99.051	0.918