Detailed information NTG0289256

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: DDE02_RS10190
• Genome accession: NZ_CP029005
• Coordinates: 2101318..2102073 (-)
• Length: 251 a.a.
• NCBI ID: WP_005069530.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AbW39
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2096318..2107073

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDE02_RS10160 (DDE02_10270)	-	2096626..2097066 (-)	441	WP_002121449.1	SRPBCC family protein	-
DDE02_RS10165 (DDE02_10275)	tadA	2097137..2097640 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
DDE02_RS10170 (DDE02_10280)	hibch	2097646..2098770 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
DDE02_RS10175 (DDE02_10285)	ung	2098767..2099480 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
DDE02_RS10180 (DDE02_10290)	-	2099534..2100130 (-)	597	WP_002121363.1	6-carboxytetrahydropterin synthase	-
DDE02_RS10185 (DDE02_10295)	gspK	2100358..2101317 (-)	960	WP_005076277.1	type II secretion system minor pseudopilin GspK	-
DDE02_RS10190 (DDE02_10300)	xcpW	2101318..2102073 (-)	756	WP_005069530.1	type II secretion system minor pseudopilin GspJ	Machinery gene
DDE02_RS10195 (DDE02_10305)	xcpV	2102073..2102453 (-)	381	WP_086376637.1	type II secretion system minor pseudopilin GspI	Machinery gene
DDE02_RS10200 (DDE02_10310)	-	2102443..2102997 (-)	555	WP_005069534.1	type II secretion system protein	-
DDE02_RS10205 (DDE02_10315)	-	2103004..2103612 (-)	609	WP_161511959.1	TetR/AcrR family transcriptional regulator	-
DDE02_RS10210 (DDE02_10320)	ycfH	2103649..2104422 (-)	774	WP_005069538.1	TatD family hydrolase	-
DDE02_RS10215 (DDE02_10325)	pilZ	2104440..2104781 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
DDE02_RS10220 (DDE02_10330)	holB	2104792..2105772 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
DDE02_RS10225 (DDE02_10335)	kdsB	2105786..2106547 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28682.93 Da
• Isoelectric Point: 9.5669

>NTDB_id=289256 DDE02_RS10190 WP_005069530.1 2101318..2102073(-) (xcpW) [Acinetobacter pittii strain AbW39]
MIKNKYFCSPGPASRLAARSEQMMRGYSEQGSSSCTQTKLRFVNPRSGFTLVELLVAIAIFAILSLLGWKVFDYLLKVRD
RNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKGIKMQLTVAGVSYEWIYSLNQ
GDLSLSKQGGQ

Nucleotide

• Length: 756 bp

>NTDB_id=289256 DDE02_RS10190 WP_005069530.1 2101318..2102073(-) (xcpW) [Acinetobacter pittii strain AbW39]
ATGATAAAGAATAAATATTTTTGCTCTCCAGGCCCAGCTTCACGTCTTGCGGCACGATCAGAGCAGATGATGAGGGGTTA
CTCCGAGCAAGGCTCTTCGTCTTGCACTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTTGCGATTGCAATTTTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGATTATTTACTAAAAGTCCGTGAT
CGTAATACTCAACATGAAGTGCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTAT
ACCTTTATCAGCCAATCAAGGCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGG
GTGTTACTGATCCATTAAAGCAAGGATTATCACCTTTTGAGCGTATCGAGTATCGATATGATCCTGATCAAAAAAAGCTT
TATCGCCTTAAATATAGTAACTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTTTTGACACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAAT
TTAGGAAGTTGCCAAAAGGAATAAAAATGCAACTCACGGTTGCAGGTGTAAGTTATGAGTGGATTTATAGCTTAAACCAA
GGTGATTTATCGCTCTCCAAACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	80.4	99.602	0.801