Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   DBK22_RS02695 Genome accession   NZ_CP028961
Coordinates   499463..499927 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain SRCM102752     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 494463..504927
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBK22_RS02680 (DBK22_00544) - 494944..496764 (+) 1821 WP_025284656.1 PAS domain-containing protein -
  DBK22_RS02685 (DBK22_00545) - 496745..497958 (-) 1214 Protein_524 aminotransferase A -
  DBK22_RS19605 (DBK22_00546) - 498159..498320 (-) 162 WP_007409608.1 hypothetical protein -
  DBK22_RS02690 (DBK22_00547) cheV 498509..499420 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  DBK22_RS02695 (DBK22_00548) kre 499463..499927 (-) 465 WP_003154622.1 YkyB family protein Regulator
  DBK22_RS02700 (DBK22_00549) - 500050..501342 (-) 1293 WP_015239757.1 MFS transporter -
  DBK22_RS02705 (DBK22_00550) - 501419..501913 (-) 495 WP_095284082.1 L,D-transpeptidase family protein -
  DBK22_RS02710 (DBK22_00551) - 501988..502851 (-) 864 WP_160241932.1 metallophosphoesterase -
  DBK22_RS02715 (DBK22_00552) fadH 502996..503760 (+) 765 WP_015417368.1 2,4-dienoyl-CoA reductase -
  DBK22_RS02720 (DBK22_00553) - 503925..504377 (+) 453 WP_236659160.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=288971 DBK22_RS02695 WP_003154622.1 499463..499927(-) (kre) [Bacillus velezensis strain SRCM102752]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=288971 DBK22_RS02695 WP_003154622.1 499463..499927(-) (kre) [Bacillus velezensis strain SRCM102752]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment