Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   DBK22_RS01325 Genome accession   NZ_CP028961
Coordinates   246062..247015 (+) Length   317 a.a.
NCBI ID   WP_160241873.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102752     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 241062..252015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBK22_RS01300 (DBK22_00259) argF 242880..243851 (+) 972 WP_012117275.1 ornithine carbamoyltransferase -
  DBK22_RS01305 (DBK22_00260) - 243927..244106 (+) 180 WP_003155070.1 YjzC family protein -
  DBK22_RS01310 (DBK22_00261) - 244143..244328 (-) 186 WP_007409129.1 YjzD family protein -
  DBK22_RS01315 (DBK22_00262) - 244589..245323 (+) 735 WP_160241871.1 hypothetical protein -
  DBK22_RS01320 (DBK22_00263) - 245406..245972 (+) 567 WP_160241872.1 hypothetical protein -
  DBK22_RS01325 (DBK22_00264) med 246062..247015 (+) 954 WP_160241873.1 BMP family ABC transporter substrate-binding protein Regulator
  DBK22_RS01330 (DBK22_00265) comZ 247028..247219 (+) 192 WP_003155061.1 ComZ family protein Regulator
  DBK22_RS01335 (DBK22_00266) - 247248..247466 (-) 219 WP_007409123.1 hypothetical protein -
  DBK22_RS01340 (DBK22_00267) - 247633..248571 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  DBK22_RS01345 (DBK22_00268) fabF 248594..249832 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  DBK22_RS01350 (DBK22_00269) - 249916..250701 (+) 786 WP_012117278.1 DUF2268 domain-containing protein -
  DBK22_RS01355 (DBK22_00270) - 250875..251861 (+) 987 WP_025284553.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35312.96 Da        Isoelectric Point: 4.6686

>NTDB_id=288963 DBK22_RS01325 WP_160241873.1 246062..247015(+) (med) [Bacillus velezensis strain SRCM102752]
MITRLVMIFSVLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDIAVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=288963 DBK22_RS01325 WP_160241873.1 246062..247015(+) (med) [Bacillus velezensis strain SRCM102752]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCATCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACAGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCGCCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAACAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.549

100

0.785

Multiple sequence alignment