Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | FORC83_RS05270 | Genome accession | NZ_CP028933 |
| Coordinates | 1009777..1010079 (+) | Length | 100 a.a. |
| NCBI ID | WP_032582988.1 | Uniprot ID | A0A5Y9CSD3 |
| Organism | Campylobacter jejuni strain FORC_083 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1004777..1015079
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC83_RS05245 (FORC83_1054) | rpsR | 1005137..1005397 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| FORC83_RS05250 (FORC83_1055) | lon | 1005457..1007832 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| FORC83_RS05255 (FORC83_1056) | - | 1007849..1008496 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| FORC83_RS05260 (FORC83_1057) | fliW | 1008657..1009046 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| FORC83_RS05265 (FORC83_1058) | proC | 1009046..1009780 (+) | 735 | WP_032582987.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| FORC83_RS05270 (FORC83_1059) | ctsT | 1009777..1010079 (+) | 303 | WP_032582988.1 | transformation system protein | Machinery gene |
| FORC83_RS05275 (FORC83_1060) | - | 1010076..1010738 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| FORC83_RS05280 (FORC83_1061) | - | 1010735..1011187 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| FORC83_RS05285 (FORC83_1062) | hemD | 1011184..1011813 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| FORC83_RS05290 (FORC83_1063) | thiE | 1011791..1012423 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| FORC83_RS05295 (FORC83_1064) | thiD | 1012413..1013225 (-) | 813 | WP_002867189.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| FORC83_RS05300 (FORC83_1065) | - | 1013222..1013908 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| FORC83_RS05305 (FORC83_1066) | - | 1013905..1014666 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=288678 FORC83_RS05270 WP_032582988.1 1009777..1010079(+) (ctsT) [Campylobacter jejuni strain FORC_083]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTTILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=288678 FORC83_RS05270 WP_032582988.1 1009777..1010079(+) (ctsT) [Campylobacter jejuni strain FORC_083]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCACCATACTTCAAACTTCAGCCTTGAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
98 |
100 |
0.98 |